PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0050s0226.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 307aa MW: 34447.9 Da PI: 4.781 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.9 | 7.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ + G +W+++++ g++R++k+c++rw +yl Kaladp0050s0226.1.p 14 KGPWTAEEDKKLIAFIITNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ Kaladp0050s0226.1.p 71 NQDEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 589***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MGRQPCCDKL GVKKGPWTAE EDKKLIAFII TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL NQDEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLKMG 120 IDPVTHEPLK PKEDTIISNE DTPASSPQES DALNPSIDIA QPAEAAAPVT DKQPNEKMIS 180 ETADAGKLLN SDVIIEDPLS LIDCLWDDQE ASQIPGFVIE EHSRRLVDGD VMMHHPHDDL 240 QQLPSDQAAG GGRFLMSDLE LPDWEESCAW LLDCQDLSIH DYGFGCFSND FELSSFNSLE 300 VDNKQF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22680.1 | 1e-89 | MYB family protein |