PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0050s0168.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 347aa MW: 39319.6 Da PI: 5.466 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++ + g+ R++k+c++rw +yl Kaladp0050s0168.1.p 14 RGLWSPEEDEKLIRYITAHGYGCWSEVPDKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ +++ G++ W+ Ia++++ gRt++++k++w+++ Kaladp0050s0168.1.p 67 RGRFTQEEEKLIISLHEVVGNR-WAQIASHLP-GRTDNEIKNYWNSW 111 89********************.*********.************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 347 aa Download sequence |
MGHHTCCNQQ KVKRGLWSPE EDEKLIRYIT AHGYGCWSEV PDKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TQEEEKLIIS LHEVVGNRWA QIASHLPGRT DNEIKNYWNS WIKKKIRKPS 120 RMQHNLSTTA FHGGYTFSTA PDMTTEQYPF HYELLNYNPN PNNPSPFENF VGTKPLPTLD 180 TDDHHQEVPS LHPSFFMFDT SSVISQDSTA TTTQLLHIPS SASNSDLAWC FVDHQAVAVG 240 GHVEMGLSTD INFMLPALVD DGDPHHLLEL TYNDQCLEKQ HDLQQQGYQS TNSNNNDELL 300 SWDESQQCPN FLFWDNAVDG SAEDEIAPFS SLVGTGTSPY PPSLLP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G63910.1 | 8e-83 | MYB family protein |