PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0050s0141.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 188aa MW: 20836.3 Da PI: 5.3091 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 202.5 | 1.7e-62 | 6 | 173 | 2 | 168 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnve 87 ++f+ +q+CyvqC+fC til+vsvP +sl+++vtv+CGhC sllsvn++kas + la+ ++++ +++ +++++ ++ + n + Kaladp0050s0141.2.p 6 NIFDLQDQICYVQCGFCATILLVSVPCSSLSNTVTVKCGHCNSLLSVNMMKASfvplNFLASLTQIEQLVQQ----KEESSADESRANAT 91 578999********************************************9995554455666654443333....33333333333333 PP YABBY 88 keesastsvssekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168 k++ ++ s s+ +++++++++ +++PPekrqr+Psayn fikeei+r+k ++P +sh+eafs+aaknWa fP++ + Kaladp0050s0141.2.p 92 KTTDQKLSPSTGPSsDTEDEDDTSINNAINKPPEKRQRAPSAYNHFIKEEIKRLKKEDPTMSHKEAFSTAAKNWANFPNMRH 173 33333333333333033444444445679*************************************************9864 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MSAFSNIFDL QDQICYVQCG FCATILLVSV PCSSLSNTVT VKCGHCNSLL SVNMMKASFV 60 PLNFLASLTQ IEQLVQQKEE SSADESRANA TKTTDQKLSP STGPSSDTED EDDTSINNAI 120 NKPPEKRQRA PSAYNHFIKE EIKRLKKEDP TMSHKEAFST AAKNWANFPN MRHKGSEESY 180 DQAERDM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 1e-56 | YABBY family protein |