PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0108.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 294aa    MW: 31299.1 Da    PI: 9.6525
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0108.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.29.4e-1482126347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+ l++ + +q G+g+W+ I+r + k+Rt+ q+ s+ qky
  Kaladp0050s0108.1.p  82 PWTEEEHRLFLIGLQQVGKGDWRGISRNFVKTRTATQVASHAQKY 126
                          8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MSTTPVRDGA APSEAGIMLF GVRLTEGSPA SSSAFRKSAS LNNLSQFEHG AQDPAAETAA  60
GYASDDLAHA PGRSRERKRG TPWTEEEHRL FLIGLQQVGK GDWRGISRNF VKTRTATQVA  120
SHAQKYFLRQ NNHNRRRRRS SLFDITSDAV VSSNMEEDHQ AMQEPVSVAG RSPTCPVPAA  180
PASLSPIKTS MELEVTPLTL GQAPASHRYC QLHHPKITVN PNCAIPIPPS SRLASLRLNP  240
ATILDPLPLS LRLPMGSASN SPASSSHSSP SGFQGVLPPD SLNSSGDSII SVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.22e-64MYB_related family protein