PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0881.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 415aa MW: 47376.1 Da PI: 5.5234

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0881.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	9.6e-18	152	198	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd llv++v ++G + W+ Ia+ ++ gR +kqc++rw+++l Kaladp0048s0881.1.p 152 KGQWTHEEDRLLVQLVDRYGIRKWSIIAQLLP-GRIGKQCRERWHNHL 198 799***************************.***********97 PP
2	Myb_DNA-binding	59.8	5.8e-19	204	246	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eEd++l++a+++lG++ W+ Ia++++ gRt++++k++w+ Kaladp0048s0881.1.p 204 KDAWTREEDKILIEAHEELGNK-WAEIANRLP-GRTENSIKNHWN 246 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MFVSDTLSKL PTADGFPFEA VLPLPDNNFL DDNHQPNHQN FNTWASVDKS FGLYQVSYLD 60 PFDPYALESH QTGLSCEMLD RPANKFYYDY IEDIKPLNYV VPDEFSCVTT NVDFTRYSAD 120 SNTAQESMIR VTSSVSSARK GPCKGKQSNV IKGQWTHEED RLLVQLVDRY GIRKWSIIAQ 180 LLPGRIGKQC RERWHNHLRP NIKKDAWTRE EDKILIEAHE ELGNKWAEIA NRLPGRTENS 240 IKNHWNATKR KEYAKRKRRI KNPKPSSLLQ EYIKSLKLGN NSSLTGKQAG RRSRKSSTNR 300 RTTETENVLP PSGQEQQVLV SVCDEFCPSD RLVPDYNDFG DVLPDFDFDG SLFEESNIES 360 LLEDMDIVVD CARDDNEQVE EVAEKALVGM GYLAKCPVQM DVDLVGKMMT QPHN*

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MFVSDTLSKL PTADGFPFEA VLPLPDNNFL DDNHQPNHQN FNTWASVDKS FGLYQVSYLD  60
PFDPYALESH QTGLSCEMLD RPANKFYYDY IEDIKPLNYV VPDEFSCVTT NVDFTRYSAD  120
SNTAQESMIR VTSSVSSARK GPCKGKQSNV IKGQWTHEED RLLVQLVDRY GIRKWSIIAQ  180
LLPGRIGKQC RERWHNHLRP NIKKDAWTRE EDKILIEAHE ELGNKWAEIA NRLPGRTENS  240
IKNHWNATKR KEYAKRKRRI KNPKPSSLLQ EYIKSLKLGN NSSLTGKQAG RRSRKSSTNR  300
RTTETENVLP PSGQEQQVLV SVCDEFCPSD RLVPDYNDFG DVLPDFDFDG SLFEESNIES  360
LLEDMDIVVD CARDDNEQVE EVAEKALVGM GYLAKCPVQM DVDLVGKMMT QPHN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-77	MYB family protein