PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0853.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 307aa MW: 33972.6 Da PI: 4.7007 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.9 | 9.1e-17 | 92 | 139 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 ykGVr++k +g+++AeIrd + + +r++lg+f+taeeAa a+ + +++ Kaladp0048s0853.4.p 92 YKGVRRRK-WGKFAAEIRDpF-----QkTRVWLGTFDTAEEAADAYRRKEIEYK 139 9****998.**********55.....34******************99888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MRSPRRDMDG FESVQKVRIF CNDPYATESD SSSDEEDHLV GDRTRPGKRY VQEILIRGDG 60 KSERNKQNEI AQRSGGFRLA ESSRKGKSST MYKGVRRRKW GKFAAEIRDP FQKTRVWLGT 120 FDTAEEAADA YRRKEIEYKK LVAEKRSLLV KTCSAFVTPP GPSSSDDTAD FCSLHSPSSV 180 LDVTGAAGRQ DRRSTGPDHR VKEESSFMME EEVLISTFLK EPIFSAELSS VFDDSKLFMC 240 ESDQYLNGSS SGLLSADGVT DSGADADLDL ALDAGFGWAS DEFAWIDETL NIEPSTLLCI 300 NGDSTA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 99 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61630.1 | 1e-23 | ERF family protein |