PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0748.9.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 201aa    MW: 22603.9 Da    PI: 8.9637
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0748.9.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY214.63.3e-66101686170
                YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 
                           +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhC++l svn+a a q + + ++l+++   ++l +  + +++ +  +  ++s+ t+
  Kaladp0048s0748.9.p  10 CPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSVLSWQDLHQH---HQLPNYLNGGQDNRIDHLGSSSKITN 96 
                          68******************************************99998877777665433...34444444444444444444444444 PP

                YABBY  96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                          + +  +    ++++     v+rPPek+qrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl
  Kaladp0048s0748.9.p  97 KMT--MRVPVQKSIE-ERAVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 168
                          444..3334444444.3579*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MGSSCVEVVC PEQLCYIPCN FCNIVLAVSV PCSSLFDIVT VRCGHCSNLW SVNMAAAFQS  60
VLSWQDLHQH HQLPNYLNGG QDNRIDHLGS SSKITNKMTM RVPVQKSIEE RAVNRPPEKK  120
QRVPSAYNQF IKEEIQRIKA NNPDITHREA FSTAAKNWAH FPHIHFGLML ETNNNNQPTR  180
FDQNNAGKRL MSKAAGLMKK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.13e-81YABBY family protein