PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0748.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 201aa MW: 22603.9 Da PI: 8.9637 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 214.6 | 3.3e-66 | 10 | 168 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhC++l svn+a a q + + ++l+++ ++l + + +++ + + ++s+ t+ Kaladp0048s0748.3.p 10 CPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSVLSWQDLHQH---HQLPNYLNGGQDNRIDHLGSSSKITN 96 68******************************************99998877777665433...34444444444444444444444444 PP YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + + + ++++ v+rPPek+qrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl Kaladp0048s0748.3.p 97 KMT--MRVPVQKSIE-ERAVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 168 444..3334444444.3579*****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MGSSCVEVVC PEQLCYIPCN FCNIVLAVSV PCSSLFDIVT VRCGHCSNLW SVNMAAAFQS 60 VLSWQDLHQH HQLPNYLNGG QDNRIDHLGS SSKITNKMTM RVPVQKSIEE RAVNRPPEKK 120 QRVPSAYNQF IKEEIQRIKA NNPDITHREA FSTAAKNWAH FPHIHFGLML ETNNNNQPTR 180 FDQNNAGKRL MSKAAGLMKK * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 3e-81 | YABBY family protein |