PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0048s0748.13.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 180aa MW: 20399.4 Da PI: 10.5971 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 182.6 | 2.2e-56 | 5 | 147 | 22 | 170 |
YABBY 22 lavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevp 110 + vsvP +slf +vtvrCGhC++l svn+a a q + + ++l+++ ++l + + +++ + + ++s+ t++ + + ++++ Kaladp0048s0748.13.p 5 IKVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSVLSWQDLHQH---HQLPNYLNGGQDNRIDHLGSSSKITNKMT--MRVPVQKSIE 88 68**************************99998877777665433...34444444444444444444444444444..3334444444 PP YABBY 111 rvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 v+rPPek+qrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl Kaladp0048s0748.13.p 89 -ERAVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 147 .3579*****************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MVKLIKVSVP CSSLFDIVTV RCGHCSNLWS VNMAAAFQSV LSWQDLHQHH QLPNYLNGGQ 60 DNRIDHLGSS SKITNKMTMR VPVQKSIEER AVNRPPEKKQ RVPSAYNQFI KEEIQRIKAN 120 NPDITHREAF STAAKNWAHF PHIHFGLMLE TNNNNQPTRF DQNNAGKRLM SKAAGLMKK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G26580.1 | 3e-68 | YABBY family protein |