PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0748.12.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 204aa MW: 22980.3 Da PI: 8.9637 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 216.9 | 6.2e-67 | 10 | 171 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesast 94 +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhC++l svn+a a q + + ++l+++ + ++l + + +++ + + ++s+ t Kaladp0048s0748.12.p 10 CPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSVLSWQDLHQHHQFTQLPNYLNGGQDNRIDHLGSSSKIT 98 68*********************************************999999999999888888888888888888877777776666 PP YABBY 95 svsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ +++ ++++ v+rPPek+qrvPsayn+fikeeiqrika+nPdi+hreafs+aaknWahfP+ihfgl Kaladp0048s0748.12.p 99 NKMTMR--VPVQKSIE-ERAVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 171 666644..44444444.4579*****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MGSSCVEVVC PEQLCYIPCN FCNIVLAVSV PCSSLFDIVT VRCGHCSNLW SVNMAAAFQS 60 VLSWQDLHQH HQFTQLPNYL NGGQDNRIDH LGSSSKITNK MTMRVPVQKS IEERAVNRPP 120 EKKQRVPSAY NQFIKEEIQR IKANNPDITH REAFSTAAKN WAHFPHIHFG LMLETNNNNQ 180 PTRFDQNNAG KRLMSKAAGL MKK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 1e-80 | YABBY family protein |