PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0727.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 229aa MW: 25934.2 Da PI: 6.4322 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.3 | 3.1e-17 | 5 | 50 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd ll+++++q+G g W++++ g++R++k+c++rw++yl Kaladp0048s0727.1.p 5 AWTEEEDHLLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYL 50 7*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.4 | 3.9e-14 | 56 | 100 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg + +E +l+++++ lG++ W++Ia++++ gRt++++k++w+ + Kaladp0048s0727.1.p 56 RGTFADDEVLLIIKLHSHLGNR-WSLIASRLP-GRTANDVKNYWNCH 100 7888999***************.*********.***********977 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MGGVAWTEEE DHLLKKCIEQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIRRGTFA 60 DDEVLLIIKL HSHLGNRWSL IASRLPGRTA NDVKNYWNCH LSKKLSKAHN NHETMSPVTT 120 ANKGGHFTAY QYQTLTSISA TSLIGPHEDQ PSLMHLEDTY GLELELVGSN GMYITCGRDE 180 ADGQNEVNKF ASELEFEGTK MTAGREISSM DNHIGDWDEV IFDMDLWG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 4e-55 | MYB family protein |