PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0661.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 486aa MW: 53527.7 Da PI: 4.8308

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0661.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.7	4.3e-34	39	129	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl+k++++++d++++ +isws+++nsfvv+d+ ef +LpkyFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k Kaladp0048s0661.1.p 39 FLSKTFDMVDDPSTDAIISWSSSNNSFVVWDPPEFGV-LLPKYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQK 118 9*********************************9.***********************999.........********* PP XXXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkks 102 +ll++i r+k Kaladp0048s0661.1.p 119 HLLKTISRRKP 129 ******985 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MDRSKAENGG AAPISAKPEA AAPPPTPAPT SNSNAPPPFL SKTFDMVDDP STDAIISWSS 60 SNNSFVVWDP PEFGVLLPKY FKHSNFSSFV RQLNTYGFRK VDPDRWEFAN EGFLRGQKHL 120 LKTISRRKPP HGQNRPHTQQ SQNPNSACVE VGKFGLEEEV ERLKRDKNVL MQELVRLRQQ 180 QQSTDNQLQT MVNRLHGMEQ RQQQMMSFLA KVVRSPGFLA QFVQQQAESK RITGGNKKRR 240 TKPEHISKNE ASSSDGQIVK YQSYANGTTK AMLRHLWDID GSSQSDSFNN KPDSFPVDGI 300 LFPNMPNKEN SANPISGAVL QDASEISEKP AALGAPECKA NVGGGKDQPT PAGSVSEVAT 360 NQPSKTLGSL FGTQDITQVS HPQSDVIMDE FPPFLDMAPE NITDITDDEL LLDPPSIEAD 420 GAFPPLDIDS ISIVDSFFNE DEELWDMLNE KSEGTDAASD SAPTVNKNNS XXXXXXXXXX 480 XXXXX*

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MDRSKAENGG AAPISAKPEA AAPPPTPAPT SNSNAPPPFL SKTFDMVDDP STDAIISWSS  60
SNNSFVVWDP PEFGVLLPKY FKHSNFSSFV RQLNTYGFRK VDPDRWEFAN EGFLRGQKHL  120
LKTISRRKPP HGQNRPHTQQ SQNPNSACVE VGKFGLEEEV ERLKRDKNVL MQELVRLRQQ  180
QQSTDNQLQT MVNRLHGMEQ RQQQMMSFLA KVVRSPGFLA QFVQQQAESK RITGGNKKRR  240
TKPEHISKNE ASSSDGQIVK YQSYANGTTK AMLRHLWDID GSSQSDSFNN KPDSFPVDGI  300
LFPNMPNKEN SANPISGAVL QDASEISEKP AALGAPECKA NVGGGKDQPT PAGSVSEVAT  360
NQPSKTLGSL FGTQDITQVS HPQSDVIMDE FPPFLDMAPE NITDITDDEL LLDPPSIEAD  420
GAFPPLDIDS ISIVDSFFNE DEELWDMLNE KSEGTDAASD SAPTVNKNNS XXXXXXXXXX  480
XXXXX*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	236	243	NKKRRTKP
2	237	242	KKRRTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	5e-94	HSF family protein