PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0504.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 357aa MW: 38774.6 Da PI: 6.8785 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.2 | 4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv++++ +G g+W+++++ g+ R++k+c++rw +yl Kaladp0048s0504.1.p 14 RGLWSPEEDEKLVNYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.8 | 1.7e-15 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++t+E l++d+++ lG++ W+ Ia++++ gRt++++k++w+ Kaladp0048s0504.1.p 67 RGSFSTQEAALIIDLHAVLGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MGHHSCCNKQ KVKRGLWSPE EDEKLVNYIT TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF STQEAALIID LHAVLGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSSS 120 PSAQSNFYIN PAAAPSTNTF PAYGLQNNCN SLMMINSNNY VSTFESELLQ GTPFSLGDDN 180 LIALASSSPK NHTHTVGSEV YVPQISPGFK IFDLVVPDDH GAGFYQPVLN YPYECEAGIN 240 TTTAWPSLMG PNSNSGIVNQ STAPLLVPTD DHRHLGLKND LIQMITCDNS SMIISSDIFD 300 DLQLAGAAAC SKLDAGFPQG RQDHGEAVIS SSSSSSSPIS SAQLAVSLCE KTCQTW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 7e-74 | MYB family protein |