PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0472.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 390aa MW: 42458 Da PI: 5.8556

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0472.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.4	2.8e-08	28	59	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+++++ + lfC+ ++ +lC C + +H Kaladp0048s0472.1.p 28 KPCDLCKSASALLFCKPDSAFLCVACDTRIHA 59 67****************************93 PP
2	zf-B_box	26.2	1.7e-08	69	115	2	42
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 + ++C+ +e+ +++ C+ + lC +C +H+ H++vpl Kaladp0048s0472.1.p 69 RLWMCEVCEQVPASVTCKADAAALCVSCDADIHSAnplsrkHERVPL 115 5789*****************************66999999999986 PP
3	CCT	71.2	2.6e-24	318	361	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrFvk++ Kaladp0048s0472.1.p 318 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFVKRT 361 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MGVVVEENCV KGYPVVGGGL GVWPMAAKPC DLCKSASALL FCKPDSAFLC VACDTRIHAV 60 NKLASRHERL WMCEVCEQVP ASVTCKADAA ALCVSCDADI HSANPLSRKH ERVPLVPFFE 120 SAETIIKKSS AANAAAASGN GSSNLVNFLV PGADEEEDHE DDVSWFIPPQ KAALTAAMDP 180 IEVKCAGVEL FYTDFDHLLD FENPNQLYLN FKNNQHVAGS DSVVPVQIKP EIVSGIGSSD 240 RCFDIDFCKS KLPFYNFDQS INHSVSSSSM DIALVPDGAS ASDISYSLGK HVNSGGGEAL 300 NINNSSATQA TQLTGLDREA RVLRYREKRK NRKFEKTIRY ASRKAYAETR PRIKGRFVKR 360 TDPDQELDRM MFSGGSIDFF EGYGVVPSY*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MGVVVEENCV KGYPVVGGGL GVWPMAAKPC DLCKSASALL FCKPDSAFLC VACDTRIHAV  60
NKLASRHERL WMCEVCEQVP ASVTCKADAA ALCVSCDADI HSANPLSRKH ERVPLVPFFE  120
SAETIIKKSS AANAAAASGN GSSNLVNFLV PGADEEEDHE DDVSWFIPPQ KAALTAAMDP  180
IEVKCAGVEL FYTDFDHLLD FENPNQLYLN FKNNQHVAGS DSVVPVQIKP EIVSGIGSSD  240
RCFDIDFCKS KLPFYNFDQS INHSVSSSSM DIALVPDGAS ASDISYSLGK HVNSGGGEAL  300
NINNSSATQA TQLTGLDREA RVLRYREKRK NRKFEKTIRY ASRKAYAETR PRIKGRFVKR  360
TDPDQELDRM MFSGGSIDFF EGYGVVPSY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-102	CO-like family protein