PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0464.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 408aa MW: 44475.7 Da PI: 9.2047

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0464.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.7e-05	169	191	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg+ F+ ++ L+ H + H Kaladp0048s0464.1.p 169 SCHKCGEKFTKWEALEAHHLSrH 191 8*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MPTTPWLSSI KKSLQCKTDP LDVHDPKART THLRAIATKR PSTKSGCSRT ISNLRDVIHG 60 SKRHVEKPVS CSPRSIQSSE FLNPIAHEVI LSGSGCELKI SGYGGDQDHH KDQNSTNGGA 120 TVGKSVSRRQ NLFELVKAGG DADTGSRIGP KSNRRRPAEM RLDENGGCSC HKCGEKFTKW 180 EALEAHHLSR HAVTELVEGD SSRKIVEIIC RTSWLKSEDS CGRIEKIFKI HNMSKTLAQF 240 EEYRELIKAN ASKLPKKHPR CLADGNELLR FHGTTVACSL GQNGCTTLCV SDKCSICRII 300 RNGFSIKKEL NGGIGVFTAS TSGRALQSVE KAEGDNSEES SVRKALVICR VIAGRVHKPL 360 ENIQDIAGQS GFDSLAGKGA DLSSNMEDLY LLNRKALLPC FVIICKS*

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MPTTPWLSSI KKSLQCKTDP LDVHDPKART THLRAIATKR PSTKSGCSRT ISNLRDVIHG  60
SKRHVEKPVS CSPRSIQSSE FLNPIAHEVI LSGSGCELKI SGYGGDQDHH KDQNSTNGGA  120
TVGKSVSRRQ NLFELVKAGG DADTGSRIGP KSNRRRPAEM RLDENGGCSC HKCGEKFTKW  180
EALEAHHLSR HAVTELVEGD SSRKIVEIIC RTSWLKSEDS CGRIEKIFKI HNMSKTLAQF  240
EEYRELIKAN ASKLPKKHPR CLADGNELLR FHGTTVACSL GQNGCTTLCV SDKCSICRII  300
RNGFSIKKEL NGGIGVFTAS TSGRALQSVE KAEGDNSEES SVRKALVICR VIAGRVHKPL  360
ENIQDIAGQS GFDSLAGKGA DLSSNMEDLY LLNRKALLPC FVIICKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-153	C2H2 family protein