PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0431.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 597aa MW: 65955.7 Da PI: 5.72

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0431.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.1e-17	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd ll+++vk++G ++W+ + ++ g+ R++k+c++rw+++l Kaladp0048s0431.1.p 20 KGPWKPEEDMLLIEYVKKHGERDWNMVRKHSGLARCGKSCRLRWNNHL 67 79********************************************97 PP
2	Myb_DNA-binding	50.7	4e-16	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++++E++l+ +++ q+G++ W++Ia++++ gRt++++k++w++ Kaladp0048s0431.1.p 73 KGPFSPDEEKLICELHSQMGNK-WARIAAMLP-GRTDNEIKNFWNT 116 79******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MVAKDEKVDA ASPAQAELKK GPWKPEEDML LIEYVKKHGE RDWNMVRKHS GLARCGKSCR 60 LRWNNHLRPN LRKGPFSPDE EKLICELHSQ MGNKWARIAA MLPGRTDNEI KNFWNTRVKR 120 LARKGVPLYP ADVQSPRPDL LNPYLHHLDA QNNASSSSLS TSSSSNLQLH PPALLSPTTP 180 TSHPLLFPPS ASSQTFQDYD VGLQDSMAMY DAALENFRQQ QQQQQMFASA MMNDAPSPQL 240 TSSLQRFKRH RSVPNLTISV PPVRHVALHP FSPLGLSTSS SSPMGRSVSV AGSPTTTTSY 300 MHVASSPHSY ASSPTGMVLS PTALQLGISM PQPAMRLPLS SSPVVNCRPT YLPRTSSFSF 360 DPMLFDLNPA AAQVTHMQNP TQTLDAIDNE LAFSVEDLGI SMDHETTGIP PNQPSYHVNG 420 PQQMQTANCN NAGLLDEFLK EAETISIRGE EKAEFSAEQA EAFLKELESD WEQSRLDCST 480 SGQASMDKPE AQTVREYQME SSMAEPELNN ELSNLLEANP MDHSFWNDGS DGLDLGCNNG 540 TPKSQASQPS DDNDHHHQYY QLNHFIDDHL GMEMHQLTGS VPVGASPTWD NMPGIY*

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MVAKDEKVDA ASPAQAELKK GPWKPEEDML LIEYVKKHGE RDWNMVRKHS GLARCGKSCR  60
LRWNNHLRPN LRKGPFSPDE EKLICELHSQ MGNKWARIAA MLPGRTDNEI KNFWNTRVKR  120
LARKGVPLYP ADVQSPRPDL LNPYLHHLDA QNNASSSSLS TSSSSNLQLH PPALLSPTTP  180
TSHPLLFPPS ASSQTFQDYD VGLQDSMAMY DAALENFRQQ QQQQQMFASA MMNDAPSPQL  240
TSSLQRFKRH RSVPNLTISV PPVRHVALHP FSPLGLSTSS SSPMGRSVSV AGSPTTTTSY  300
MHVASSPHSY ASSPTGMVLS PTALQLGISM PQPAMRLPLS SSPVVNCRPT YLPRTSSFSF  360
DPMLFDLNPA AAQVTHMQNP TQTLDAIDNE LAFSVEDLGI SMDHETTGIP PNQPSYHVNG  420
PQQMQTANCN NAGLLDEFLK EAETISIRGE EKAEFSAEQA EAFLKELESD WEQSRLDCST  480
SGQASMDKPE AQTVREYQME SSMAEPELNN ELSNLLEANP MDHSFWNDGS DGLDLGCNNG  540
TPKSQASQPS DDNDHHHQYY QLNHFIDDHL GMEMHQLTGS VPVGASPTWD NMPGIY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	3e-57	MYB family protein