PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0377.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 687aa MW: 76845.5 Da PI: 6.2674

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0377.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.4	2.2e-10	637	683	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 rW+ E++ + +v+++G+g+Wk I + + + Rt+ ++k++w+ Kaladp0048s0377.3.p 637 RWSVLEEDTIRAGVQRYGKGNWKVILNAYPdifEDRTEVDIKDKWRR 683 9********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MGTSCILDKW MVEFGVRSRR HDRLVVKMLS LVPQLRDDVG LKKMVLFRAI DSEVDEGSVS 60 EKTLDVLEIA FELDRKQGLD VLESMKAAYC AVAVDCVARF VKSVGEGDKY FKAVKRVWRK 120 RIGRLFSLNV GLVSEQLDTW RNTVESAIWD DNVRDKLFVT NTRYEALIAT KGYLDEAWKT 180 VGPSFLELLV SSTLGKSFVE AQSLCLPRTS EPIEGGSQRP FDTPDPDIRT EKCDGEVLKG 240 PCDPSSPISS PMLKNKDRDD VPNILTQNLG FNSKNPNVEH REEVSEASLC AHTVNLHPDE 300 TVKLAVFGTA EEQNLPPTSR GLTLDQSENV EPVHLKAKGA EEADLPLPGV SANNSFDNDD 360 HLKGADTNVV KEKEADMPSS CPHGNLPSQS NSKVLYKEDT NKLRGRSKHA GRFKKRFKRV 420 RINDTDDVDL EESDNQYDLL PENTVAKIHE ELKSSSIELH AVVKDPLPGA LHVAEVVISD 480 VSRNCIPREI PVASITNMDT LNSCDVEEEK GKDKISTSHA IKASASSMEG SAMNLKSNQG 540 HERDPRDAAI NASTPEAVGD GDKNLQNEGS GHENRQKRVN LWERNCSAHT YKWDDSVDGS 600 PGESPRLRTL RTPRPYVNSP LKKYDSLKFA RRRKIKRWSV LEEDTIRAGV QRYGKGNWKV 660 ILNAYPDIFE DRTEVDIKDK WRRMTN*

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MGTSCILDKW MVEFGVRSRR HDRLVVKMLS LVPQLRDDVG LKKMVLFRAI DSEVDEGSVS  60
EKTLDVLEIA FELDRKQGLD VLESMKAAYC AVAVDCVARF VKSVGEGDKY FKAVKRVWRK  120
RIGRLFSLNV GLVSEQLDTW RNTVESAIWD DNVRDKLFVT NTRYEALIAT KGYLDEAWKT  180
VGPSFLELLV SSTLGKSFVE AQSLCLPRTS EPIEGGSQRP FDTPDPDIRT EKCDGEVLKG  240
PCDPSSPISS PMLKNKDRDD VPNILTQNLG FNSKNPNVEH REEVSEASLC AHTVNLHPDE  300
TVKLAVFGTA EEQNLPPTSR GLTLDQSENV EPVHLKAKGA EEADLPLPGV SANNSFDNDD  360
HLKGADTNVV KEKEADMPSS CPHGNLPSQS NSKVLYKEDT NKLRGRSKHA GRFKKRFKRV  420
RINDTDDVDL EESDNQYDLL PENTVAKIHE ELKSSSIELH AVVKDPLPGA LHVAEVVISD  480
VSRNCIPREI PVASITNMDT LNSCDVEEEK GKDKISTSHA IKASASSMEG SAMNLKSNQG  540
HERDPRDAAI NASTPEAVGD GDKNLQNEGS GHENRQKRVN LWERNCSAHT YKWDDSVDGS  600
PGESPRLRTL RTPRPYVNSP LKKYDSLKFA RRRKIKRWSV LEEDTIRAGV QRYGKGNWKV  660
ILNAYPDIFE DRTEVDIKDK WRRMTN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	1e-13	MYB_related family protein