PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0285.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 530aa MW: 59055.5 Da PI: 9.2187

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0285.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.4e-17	52	98	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed+ll +av+++ g++Wk+Ia+ ++ gR++ qc +rwqk+l Kaladp0048s0285.1.p 52 KGGWTPREDDLLRQAVEEFKGKSWKKIAEFFP-GRSEVQCLHRWQKVL 98 688***************************.**********986 PP
2	Myb_DNA-binding	54.7	2.3e-17	104	150	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++ + v+ +G+ W++Ia+ ++ gR +kqc++rw+++l Kaladp0048s0285.1.p 104 KGPWTQEEDDKITEMVAGYGPTKWSLIAKALP-GRIGKQCRERWHNHL 150 79****************************.***********97 PP
3	Myb_DNA-binding	52.9	8.3e-17	156	199	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT eE++ l +a++ +G++ W+ Ia+ ++ gR+++ +k++w++ Kaladp0048s0285.1.p 156 RDSWTLEEELALMNAHRAHGNK-WAEIAKALP-GRSDNAIKNHWNS 199 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MVELCLENKQ SVPTSSSSYS DETVSARSPG FSSPATNSSH RRRTTGPVRR VKGGWTPRED 60 DLLRQAVEEF KGKSWKKIAE FFPGRSEVQC LHRWQKVLDP DLVKGPWTQE EDDKITEMVA 120 GYGPTKWSLI AKALPGRIGK QCRERWHNHL NPEIKRDSWT LEEELALMNA HRAHGNKWAE 180 IAKALPGRSD NAIKNHWNSS LKKKMGFYVA NGSLPPITKT GSPRGVMNMK KQGKRVKFPV 240 RSAGESGSNA EKITGITVCC KLEGDLFETQ ALLEDALYSS GTPSNDSEDA KSIRNQRLCP 300 DIQCSFSGLV FKEKQNCGGP GSMDGTKVTG SEQLHSCLYY EPPKFNIVGR TDSGLLNMPH 360 SDCRHGPPLS PARFHSPLGE KRLDSCIRSP EHILKSAART FQNTPSIFRK RRSETQLQSP 420 STKSDSAEEE LMSEYSLNDG KNLKSDEIRK FESGDELFFG STTHLSSSKD GESYGKSLNT 480 FNRYRLTYKR TAILKSVEKR LDLTFAGLAV KDCSPTTEGS QCTNNFEMT*

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MVELCLENKQ SVPTSSSSYS DETVSARSPG FSSPATNSSH RRRTTGPVRR VKGGWTPRED  60
DLLRQAVEEF KGKSWKKIAE FFPGRSEVQC LHRWQKVLDP DLVKGPWTQE EDDKITEMVA  120
GYGPTKWSLI AKALPGRIGK QCRERWHNHL NPEIKRDSWT LEEELALMNA HRAHGNKWAE  180
IAKALPGRSD NAIKNHWNSS LKKKMGFYVA NGSLPPITKT GSPRGVMNMK KQGKRVKFPV  240
RSAGESGSNA EKITGITVCC KLEGDLFETQ ALLEDALYSS GTPSNDSEDA KSIRNQRLCP  300
DIQCSFSGLV FKEKQNCGGP GSMDGTKVTG SEQLHSCLYY EPPKFNIVGR TDSGLLNMPH  360
SDCRHGPPLS PARFHSPLGE KRLDSCIRSP EHILKSAART FQNTPSIFRK RRSETQLQSP  420
STKSDSAEEE LMSEYSLNDG KNLKSDEIRK FESGDELFFG STTHLSSSKD GESYGKSLNT  480
FNRYRLTYKR TAILKSVEKR LDLTFAGLAV KDCSPTTEGS QCTNNFEMT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-121	MYB family protein