PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0278.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 311aa    MW: 35083.5 Da    PI: 7.3069
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0278.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.5e-092872345
                         SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                          WT eE +l+ +a +++ ++   +W+++a++++ g++  +++  +q
  Kaladp0048s0278.1.p 28 VWTHEENKLFENALALYDKDtpdRWAKVAAMIP-GKSVVDVIKQYQ 72
                         5********************************.*******99998 PP
2Myb_DNA-binding43.38.7e-14136180347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +W ++E+ l++ + k++G+g+W+ Iar + ++Rt+ q+ s+ qky
  Kaladp0048s0278.1.p 136 PWNEDEHRLFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKY 180
                          8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MNWGVEVLSS SSHGGSSDWL FEISMNCVWT HEENKLFENA LALYDKDTPD RWAKVAAMIP  60
GKSVVDVIKQ YQALEEDIID IEAGLIPIPG YNSSSSFTME WMVNRDFEGM KQICGSEVKR  120
CSTNLGFNQE MKKGVPWNED EHRLFLMGLK KYGKGDWRNI ARNFVTTRTP TQVASHAQKY  180
FIRQLNRGKD KRRSSIHDTT IVNLMDHASP SADTNKDLLQ DQPSSVEKSP QPSDLVCLTQ  240
TFYSPKVANR ESLMVFNSST ENSFTTSTPR TAATYGHSLK EQTMHRSIFL GSQCGAQTMV  300
FHVPSVQHRQ *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-92MYB family protein