PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0209.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 337aa MW: 37471.9 Da PI: 6.6262 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.4 | 1e-10 | 1 | 40 | 9 | 48 |
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 d++lvd ++ G g+W++ ++ g++R++k+c++rw +yl Kaladp0048s0209.1.p 1 DKKLVDHIETNGQGSWRALPKLAGLNRCGKSCRLRWTNYL 40 79************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.9e-17 | 46 | 91 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++I+++++ gRt++++k++w+++l Kaladp0048s0209.1.p 46 RGKFSEEEEQAIINLHSVLGNK-WSAISSHLP-GRTDNEIKNFWNTHL 91 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
DKKLVDHIET NGQGSWRALP KLAGLNRCGK SCRLRWTNYL RPDIKRGKFS EEEEQAIINL 60 HSVLGNKWSA ISSHLPGRTD NEIKNFWNTH LKKKLLQLGI DPITHRPRTD HLNLLANLPQ 120 LLAAANLTHL ISNSANPWDN AMRLQQHLSS DPRQHLAKVQ LMSNLLQALN SAANPPLNLD 180 IMMSSLFKKQ GSFQDQRVLE SLTRMNNSGQ MEASHEFGNG GQIGHFSAGF CNPMQLDDFT 240 TLESCEPFLN SNSSQFGGSY CAPFSDHSSE IPALVSATST ERGISTINET TNNSKYHPSA 300 EASNPTSMTS TTFEAWGDHQ MVDDEASESY WKDIIE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 4e-77 | MYB family protein |