PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0197.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 357aa MW: 39356.1 Da PI: 8.3129

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0197.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.3e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++ +G+g+W++++ g+ R+ k+c++rw +yl Kaladp0048s0197.1.p 15 KGPWTPEEDIILVSYIQDHGPGNWRLVPTNTGLQRCSKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	48.2	2.5e-15	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ ++++ +++G++ W++Ia++++ Rt++++k++w+++l Kaladp0048s0197.1.p 68 RGNFTDQEEKMIIHLQALFGNR-WAAIASYLP-QRTDNDIKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGRSPGCDKV VGVKKGPWTP EEDIILVSYI QDHGPGNWRL VPTNTGLQRC SKSCRLRWTN 60 YLRPGIRRGN FTDQEEKMII HLQALFGNRW AAIASYLPQR TDNDIKNYWN THLKKKLKML 120 QPGKTNNNTN SQDDNSSSSS ASRQTHLKGQ WEKRLQTDIH MAKQALCAAL SLDKPVYETK 180 THSPPQPSNL NPLPAPTPTR TAGVTQASST PAASTYASSA ENIARLLENW SKKKSSFGSD 240 AQMTKIGQNY SLKTAKQQLV GSSSSSDEGA LSSTTPDQLD SILGNSNVTD LHQDNVMVFQ 300 EESKPLNMEL AGQALQMPLT VLEKWLLFGD GSNDITSQGQ DDLLDMFLDG NDAVFF*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGRSPGCDKV VGVKKGPWTP EEDIILVSYI QDHGPGNWRL VPTNTGLQRC SKSCRLRWTN  60
YLRPGIRRGN FTDQEEKMII HLQALFGNRW AAIASYLPQR TDNDIKNYWN THLKKKLKML  120
QPGKTNNNTN SQDDNSSSSS ASRQTHLKGQ WEKRLQTDIH MAKQALCAAL SLDKPVYETK  180
THSPPQPSNL NPLPAPTPTR TAGVTQASST PAASTYASSA ENIARLLENW SKKKSSFGSD  240
AQMTKIGQNY SLKTAKQQLV GSSSSSDEGA LSSTTPDQLD SILGNSNVTD LHQDNVMVFQ  300
EESKPLNMEL AGQALQMPLT VLEKWLLFGD GSNDITSQGQ DDLLDMFLDG NDAVFF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	119	LKKKLKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	5e-90	MYB family protein