PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0047s0273.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 474aa MW: 52940.8 Da PI: 6.1503

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0047s0273.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	1.9e-15	24	68	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd+ll + ++ +G+++W+ Ia++++ +t qc+ rw++yl Kaladp0047s0273.1.p 24 TWTQEEDDLLREQITTHGTENWSIIASKFN-DKTTRQCRRRWYTYL 68 6***************************.***********97 PP
2	Myb_DNA-binding	46.4	9.2e-15	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT+eEd ll +a k++G++ W+ Ia+ + gRt++ +k+r+ + Kaladp0047s0273.1.p 74 KGGWTPEEDMLLCEAQKLYGNK-WTEIAKVVS-GRTDNAVKNRFST 117 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MKRKSNSVEG EGEGEKHKER HIVTWTQEED DLLREQITTH GTENWSIIAS KFNDKTTRQC 60 RRRWYTYLNC DFKKGGWTPE EDMLLCEAQK LYGNKWTEIA KVVSGRTDNA VKNRFSTLCK 120 KRAKCEAVAD ENSNVSVNVK ATKILSQESN ADEPQNTTAP LMIRQRHLPG LSGNYNLENA 180 SLRGCETAMT NKQRTPLSVL GQNILNAGYS SATRNKSSGK NTLCDEAAMD KTNGESFLKK 240 DDPKIFALLQ QAELLSSLAQ KVNAEKTEKS LEDAWKVFQD YLNKNKENEV QGSQISDMDL 300 HLEDFKDLLE DLRSSNEISQ PSSWRQPDQY ESPLSSEYST GSTLVSNAAA ELPEGGFERM 360 NINAKDGDNK TERRILLDQT ANQAVSDDAD QQHVPKKNNV VVSASSSTDF SSPPHVTPIF 420 RSIAAEIPSP KFSESERNFL MKALGMESDS RPNSNLNSSN ISPSCKRALL HSL*

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MKRKSNSVEG EGEGEKHKER HIVTWTQEED DLLREQITTH GTENWSIIAS KFNDKTTRQC  60
RRRWYTYLNC DFKKGGWTPE EDMLLCEAQK LYGNKWTEIA KVVSGRTDNA VKNRFSTLCK  120
KRAKCEAVAD ENSNVSVNVK ATKILSQESN ADEPQNTTAP LMIRQRHLPG LSGNYNLENA  180
SLRGCETAMT NKQRTPLSVL GQNILNAGYS SATRNKSSGK NTLCDEAAMD KTNGESFLKK  240
DDPKIFALLQ QAELLSSLAQ KVNAEKTEKS LEDAWKVFQD YLNKNKENEV QGSQISDMDL  300
HLEDFKDLLE DLRSSNEISQ PSSWRQPDQY ESPLSSEYST GSTLVSNAAA ELPEGGFERM  360
NINAKDGDNK TERRILLDQT ANQAVSDDAD QQHVPKKNNV VVSASSSTDF SSPPHVTPIF  420
RSIAAEIPSP KFSESERNFL MKALGMESDS RPNSNLNSSN ISPSCKRALL HSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-128	MYB family protein