PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0047s0205.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 295aa MW: 32984 Da PI: 7.4985

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0047s0205.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.8	7.6e-15	18	108	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt++ +Liea ++ +l+rg+l++++W++v++ + + ++ +r+ +qCk++++ ++k+yk +k++ + + s++p++d+l Kaladp0047s0205.1.p 18 CWTEEASSTLIEAWGRRYLDLNRGNLRQKDWQQVADIVnarhgQTKKTHRTDVQCKNRIDTIKKKYKVEKARVSASAGMLASSWPFYDRL 107 7************************************999999999*******************999998888889****9 PP trihelix 86 e 86 + Kaladp0047s0205.1.p 108 D 108 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MTDSAAPSSR PVPVREDCWT EEASSTLIEA WGRRYLDLNR GNLRQKDWQQ VADIVNARHG 60 QTKKTHRTDV QCKNRIDTIK KKYKVEKARV SASAGMLASS WPFYDRLDEL IGSNSKRPAA 120 GGAGSAVSVS VSESLSHSPP MALPLPYPYR KSAPLATAVL PKKRASPMDD SYFRRNYSAV 180 AAAAAAAATA DEEEEDEDVR EEGEEEDDDF VQGFRGYEDS EDGIRKLARA IRKFGDVYEK 240 VEAEKQNQMI EMEKQRMQLA KDLEVQRMQM FVNMQLQLKK IKIAKGNKSN GEST*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	5e-61	Trihelix family protein