PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0047s0039.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 315aa MW: 33643 Da PI: 7.1538

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0047s0039.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.4	8.1e-19	10	55	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l ++v +G ++W+tI + ++ gR++k+c++rw + Kaladp0047s0039.1.p 10 KGPWSPEEDDKLRELVVVHGARNWSTICKSIP-GRSGKSCRLRWCNQ 55 79****************************.*********985 PP
2	Myb_DNA-binding	53.9	4.2e-17	64	106	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde+++ a +++G++ W++Iar+++ gRt++++k++w++ Kaladp0047s0039.1.p 64 PFTAEEDEIIIGAQARYGNR-WAAIARMLN-GRTDNSIKNHWNST 106 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MEQKELGRIK GPWSPEEDDK LRELVVVHGA RNWSTICKSI PGRSGKSCRL RWCNQLSPEV 60 EHRPFTAEED EIIIGAQARY GNRWAAIARM LNGRTDNSIK NHWNSTLKRK FSAMAAESNG 120 AVLECNNRPL KRADSVGAAV GTGLALSPGS PSGSDVCDST HPVTQTSPVG PVFLPVTRTT 180 SAPQALMLID PVTDLTLSLP GAEAAARPTT PPAPPPNPSR ASVGSDNPVK EIGSMSFGPQ 240 LLTVMQEIIK EEVKKVMSNL VIDQNKVIVH TGSVHENGVV VGVSDGAGDD DNEVRCIGIS 300 KVDHQRQPNG GSRD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	3e-67	MYB family protein