PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0046s0332.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 948aa MW: 106913 Da PI: 5.5359

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0046s0332.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	9.4e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l Kaladp0046s0332.2.p 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.9	1.6e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l Kaladp0046s0332.2.p 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 948 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACARD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKKREL KAAGIDNRHR KRKRKGIDYN AEIPFEKKPP PGFYDVTDED RPVEQPKFPT 240 TIEELEGKRR ADVEAQLRRQ DAARNKIAER QDVLSAIVQA NKLNDPETVR KRSKLMLPPP 300 QISDQELEEI AKMGYASDLL AGSEELTEGS GATRALLAQY AQTPLPGMSQ LRTPQRTPAG 360 KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP KKREIQTPNV MLTPSSTPGA 420 AGLTPRIGMT PTRDGYSFGL TPKGTPIRDG LHINEGLEVH DSVKLEQRKR ADMKRSLLSG 480 LSGLPQPKNE YQIVMQAPPD DDEDLEEKIE EDMSDRLARE RAEEEARIQV LLRKRSKVLQ 540 RELPRPPVSS LDLLRNSLMR TDEDKSSFVP PTSIEQADEL IRKEFLCLLE HDNAKYPLEE 600 KSEKDKKIRG KRGKFAGTVP TIDDFEEDEM KEAGIMIKEE AEFLRAAMGH ENGSLEEFVE 660 AHKTCLNDLM YFPTRNAYGL SSVAGNAEKI SALQSEFENV KKRMDEDTRK AQKLEQKIKV 720 LTQGYQGRSL KLWSQVEATS KQKDTATTEL ECFRVLHKQE QLAASHRING LREEVKKQKE 780 LEETLQRHYG KLLVEQERVK SLVNEYRLQE EMAAEKRAAE LSDAAATAAI TNIPNDATTF 840 SESTDLVASS AEHANATIKG ESSPSRVPRQ SMDVAQEQTF SISNLDAEAN KADIAQSNEE 900 QAPTEVSYLV STSEDQEDES LKSEDKAEQD QAAHVSARQG NETETGN*

Sequence ? help Back to Top

Protein Sequence Length: 948 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACARD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKKREL KAAGIDNRHR KRKRKGIDYN AEIPFEKKPP PGFYDVTDED RPVEQPKFPT  240
TIEELEGKRR ADVEAQLRRQ DAARNKIAER QDVLSAIVQA NKLNDPETVR KRSKLMLPPP  300
QISDQELEEI AKMGYASDLL AGSEELTEGS GATRALLAQY AQTPLPGMSQ LRTPQRTPAG  360
KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP KKREIQTPNV MLTPSSTPGA  420
AGLTPRIGMT PTRDGYSFGL TPKGTPIRDG LHINEGLEVH DSVKLEQRKR ADMKRSLLSG  480
LSGLPQPKNE YQIVMQAPPD DDEDLEEKIE EDMSDRLARE RAEEEARIQV LLRKRSKVLQ  540
RELPRPPVSS LDLLRNSLMR TDEDKSSFVP PTSIEQADEL IRKEFLCLLE HDNAKYPLEE  600
KSEKDKKIRG KRGKFAGTVP TIDDFEEDEM KEAGIMIKEE AEFLRAAMGH ENGSLEEFVE  660
AHKTCLNDLM YFPTRNAYGL SSVAGNAEKI SALQSEFENV KKRMDEDTRK AQKLEQKIKV  720
LTQGYQGRSL KLWSQVEATS KQKDTATTEL ECFRVLHKQE QLAASHRING LREEVKKQKE  780
LEETLQRHYG KLLVEQERVK SLVNEYRLQE EMAAEKRAAE LSDAAATAAI TNIPNDATTF  840
SESTDLVASS AEHANATIKG ESSPSRVPRQ SMDVAQEQTF SISNLDAEAN KADIAQSNEE  900
QAPTEVSYLV STSEDQEDES LKSEDKAEQD QAAHVSARQG NETETGN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KKRELKAAGIDNRHRKRKRK
2	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein