PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0046s0311.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 506aa    MW: 55690.2 Da    PI: 6.7477
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0046s0311.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00014394414323
                          ETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                          C +Cgk F ++ ++++H+++ H
  Kaladp0046s0311.2.p 394 CDKCGKAF-QQAEMEKHMKVfH 414
                          ********.**********988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
MQESLIAGKG IVFRRFLTPV LYEGSGDKIK LPLSCFKELS DEGAFDKGPL YFRLSVVRQN  60
SPSDPNPIGE DSQRSTHSGV LEFTADEDCV ALPRHVWNNL FPTDLIAAPL VEVRYVWLPK  120
GVYAKLQPDR IGFSDIPNHK AVLETILRHH ATLSENDLLT VNHGILTYTL RVLQLKPSSS  180
VSVLETDIEV DVVSPDKKSI TADQPYLQPL QLGKSESGAL DEGNYVYYKF SVNGDVWSII  240
ESGDANVCVK METGENDGDT DLYVSRHPLL FPTTHQHQWS SHDVGSKTLT MTAKDENLGA  300
GSYTVGVYGF KGTSKYKLTV TIEAAASQKV GPKATSKSQA VEVDTVECRN CKHSIPSRSI  360
TLHEAYCSRN NVTCKRPGCG VVLRVGEAKN HVHCDKCGKA FQQAEMEKHM KVFHEPLQCP  420
CGVLLEKEDM VQHQAADCPL RLITCRFCGD MVRAGNSAID VRDRMRGLSE HESGCGSRTA  480
PCSTCGRSVM LKDMDIHQVA VHPNN*