PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0046s0311.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 571aa MW: 63596.3 Da PI: 7.254

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0046s0311.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	459	479	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C +Cgk F ++ ++++H+++ H Kaladp0046s0311.1.p 459 CDKCGKAF-QQAEMEKHMKVfH 479 ******.********988 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MDFELRRARE KLEKEQKERK EKARLKLERE RKAKLEAFRQ QEAIEAARRT RRIDAAEAQL 60 KADEQMQESL IAGKGIVFRR FLTPVLYEGS GDKIKLPLSC FKELSDEGAF DKGPLYFRLS 120 VVRQNSPSDP NPIGEDSQRS THSGVLEFTA DEDCVALPRH VWNNLFPTDL IAAPLVEVRY 180 VWLPKGVYAK LQPDRIGFSD IPNHKAVLET ILRHHATLSE NDLLTVNHGI LTYTLRVLQL 240 KPSSSVSVLE TDIEVDVVSP DKKSITADQP YLQPLQLGKS ESGALDEGNY VYYKFSVNGD 300 VWSIIESGDA NVCVKMETGE NDGDTDLYVS RHPLLFPTTH QHQWSSHDVG SKTLTMTAKD 360 ENLGAGSYTV GVYGFKGTSK YKLTVTIEAA ASQKVGPKAT SKSQAVEVDT VECRNCKHSI 420 PSRSITLHEA YCSRNNVTCK RPGCGVVLRV GEAKNHVHCD KCGKAFQQAE MEKHMKVFHE 480 PLQCPCGVLL EKEDMVQHQA ADCPLRLITC RFCGDMVRAG NSAIDVRDRM RGLSEHESGC 540 GSRTAPCSTC GRSVMLKDMD IHQVAVHPNN *

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MDFELRRARE KLEKEQKERK EKARLKLERE RKAKLEAFRQ QEAIEAARRT RRIDAAEAQL  60
KADEQMQESL IAGKGIVFRR FLTPVLYEGS GDKIKLPLSC FKELSDEGAF DKGPLYFRLS  120
VVRQNSPSDP NPIGEDSQRS THSGVLEFTA DEDCVALPRH VWNNLFPTDL IAAPLVEVRY  180
VWLPKGVYAK LQPDRIGFSD IPNHKAVLET ILRHHATLSE NDLLTVNHGI LTYTLRVLQL  240
KPSSSVSVLE TDIEVDVVSP DKKSITADQP YLQPLQLGKS ESGALDEGNY VYYKFSVNGD  300
VWSIIESGDA NVCVKMETGE NDGDTDLYVS RHPLLFPTTH QHQWSSHDVG SKTLTMTAKD  360
ENLGAGSYTV GVYGFKGTSK YKLTVTIEAA ASQKVGPKAT SKSQAVEVDT VECRNCKHSI  420
PSRSITLHEA YCSRNNVTCK RPGCGVVLRV GEAKNHVHCD KCGKAFQQAE MEKHMKVFHE  480
PLQCPCGVLL EKEDMVQHQA ADCPLRLITC RFCGDMVRAG NSAIDVRDRM RGLSEHESGC  540
GSRTAPCSTC GRSVMLKDMD IHQVAVHPNN *