PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0046s0154.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 310aa    MW: 33618.8 Da    PI: 6.2814
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0046s0154.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73.1e-06187230755
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          e +rrRR+ i +++  L+ l P++   +       ++Le +++YIk+Lq
  Kaladp0046s0154.1.p 187 ETDRRRRKIIGERLKALQGLAPQS---G--QGHPGDVLEDTIDYIKYLQ 230
                          679********************9...4..444589************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MEEKGSSEDP AQMPSGSVLS GLRTHVAYST SAPNQHCVHS SNAMALRQWM YYPYMPQNCA  60
NVMSGASSSG CQASPYGDNH WKIASSSSPP SIVKSVPQMF SNGGWYGAPT GAANSMVCGK  120
NVWYGMPQLE DELPHKLGSE SSQSQIQDDI STTEGGSRNG VHQANVAILD LVPEQHNKAK  180
KLGSTYETDR RRRKIIGERL KALQGLAPQS GQGHPGDVLE DTIDYIKYLQ LQLKDLSHSR  240
FGGESVSDPL VFIEGYGHYL VHEPMVNEPL DEMMGKLLEV NPQGAAALLE SKGLCIRDMS  300
LAKRLQDPV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.12e-15bHLH family protein