PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0046s0120.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 320aa    MW: 35770.9 Da    PI: 5.4662
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0046s0120.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-151663148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT +Ed++l + ++ +G ++W++ +r  g+ R++k+c++rw +yl
  Kaladp0046s0120.1.p 16 KGPWTSDEDQILTNHINFHGHPNWRALPRLAGLARCGKSCRLRWTNYL 63
                         79********************************************97 PP
2Myb_DNA-binding491.4e-1569114148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T eE+e +++ +++lG++ W++Ia++++ gRt++++k+ w+++l
  Kaladp0046s0120.1.p  69 RGNFTREEEETIINSHELLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 114
                          89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MVRSPSSTEQ TAGLKKGPWT SDEDQILTNH INFHGHPNWR ALPRLAGLAR CGKSCRLRWT  60
NYLQPGIKRG NFTREEEETI INSHELLGNR WSAIAAKLPG RTDNEIKNVW HTHLKKRLLN  120
NNQNQPQGST ASIGGSHNNR SDDVIIIDES LFHQARDDHS NTNPLVQHAH ADRDDQNPND  180
APACNTHSHT IHVPSISPQD SYGKASYNNC EQVPSPEAFP ETDESFWSDV LSSDYDYRSG  240
SSSMKSYYTP CHQQPFLPVS DNSVVNMEMD YPQEAAGSSF PDVPANNVNN NNNAVQDGDD  300
VDDFWFDVLF RAGEHPILS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06180.14e-62MYB family protein