PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0488.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 431aa MW: 47925.1 Da PI: 6.5446

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0488.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	27	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ E +l d+v ++G g+W+++ r g+ R++k+c++rw ++l Kaladp0045s0488.1.p 27 KGPWTAAENAILFDYVSKHGEGNWNAVQRNSGLQRCGKSCRLRWANHL 74 79******************************************9986 PP
2	Myb_DNA-binding	54.3	3.1e-17	80	123	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l+++++++lG++ W++ a+ m+ gRt++++k++w++ Kaladp0045s0488.1.p 80 KGAFTPEEERLILELHAKLGNK-WARMAAQMP-GRTDNEIKNYWNT 123 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MASSSSHDTT PARSSSGAGE EGVALKKGPW TAAENAILFD YVSKHGEGNW NAVQRNSGLQ 60 RCGKSCRLRW ANHLRPNLKK GAFTPEEERL ILELHAKLGN KWARMAAQMP GRTDNEIKNY 120 WNTRMKRHQR AGLAICPTHI HSGQHRQHRL QRHRKQHHAL KSTSHTQMLD FQNQRAVSFN 180 QTSQPQSYLF TAHQAPIPSQ FNFFMEQSNS NSQSYHTSLS PAVASHSLLL NNNPPHLPPH 240 QSNYHQDPPD SSADFGFVRL LSDHRSDGML DDGFYAVEFG NENSNNQLFQ PTFKNMKEDE 300 GHQGAVTMKE TTPENSSSGL TSIGVMVVEP EPEPEPEPEP VVDIINPLED ELTSLIDSFP 360 AASPTPQWYR RGSTMAEINN SSGDANGEVV LDLCPTHQLI MPSLEAEATD QVLSLGGSTS 420 MLWHELPSIY *

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MASSSSHDTT PARSSSGAGE EGVALKKGPW TAAENAILFD YVSKHGEGNW NAVQRNSGLQ  60
RCGKSCRLRW ANHLRPNLKK GAFTPEEERL ILELHAKLGN KWARMAAQMP GRTDNEIKNY  120
WNTRMKRHQR AGLAICPTHI HSGQHRQHRL QRHRKQHHAL KSTSHTQMLD FQNQRAVSFN  180
QTSQPQSYLF TAHQAPIPSQ FNFFMEQSNS NSQSYHTSLS PAVASHSLLL NNNPPHLPPH  240
QSNYHQDPPD SSADFGFVRL LSDHRSDGML DDGFYAVEFG NENSNNQLFQ PTFKNMKEDE  300
GHQGAVTMKE TTPENSSSGL TSIGVMVVEP EPEPEPEPEP VVDIINPLED ELTSLIDSFP  360
AASPTPQWYR RGSTMAEINN SSGDANGEVV LDLCPTHQLI MPSLEAEATD QVLSLGGSTS  420
MLWHELPSIY *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	8e-69	MYB family protein