PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0459.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 284aa    MW: 32197.5 Da    PI: 8.4737
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0459.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.6e-17110155147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg W + Ed +l+++v q+G+++W++Ia++++ gR++k+c++rw++ 
  Kaladp0045s0459.2.p 110 RGHWRPAEDVKLKELVDQFGPHNWNLIAERLP-GRSGKSCRLRWFNQ 155
                          899*****************************.***********996 PP
2Myb_DNA-binding49.11.3e-15163205246
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                           ++++eE+e+l++ +k++G++ W+ I++ ++ gRt++ +k++w+ 
  Kaladp0045s0459.2.p 163 RPFSAEEEEKLLQSHKLFGNK-WAMISKLFP-GRTDNAVKNHWHV 205
                          68*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MKLQNLKSNA ANGYTSFFPC PPPLFPSKNL DKEETGGNMR KPSDLNHASV WDEGENTYYF  60
KSNRFDLNER LYGEGRSTDE AAEIKHIYQD CDAEAPNDGR SENIQKLCAR GHWRPAEDVK  120
LKELVDQFGP HNWNLIAERL PGRSGKSCRL RWFNQLDPKI NKRPFSAEEE EKLLQSHKLF  180
GNKWAMISKL FPGRTDNAVK NHWHVIMARK QREQNICVYK KLKPNPISAA SMKEFVACSD  240
ESTVTTVSNT GVELMLTPTS VRETPCLFAK SPQPPSPMGM PPD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17800.16e-64MYB family protein