PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0045s0459.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 359aa MW: 40360.7 Da PI: 7.9636 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.9e-17 | 110 | 155 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+++W++Ia++++ gR++k+c++rw++ Kaladp0045s0459.1.p 110 RGHWRPAEDVKLKELVDQFGPHNWNLIAERLP-GRSGKSCRLRWFNQ 155 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.8e-15 | 163 | 205 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++eE+e+l++ +k++G++ W+ I++ ++ gRt++ +k++w+ Kaladp0045s0459.1.p 163 RPFSAEEEEKLLQSHKLFGNK-WAMISKLFP-GRTDNAVKNHWHV 205 68*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MKLQNLKSNA ANGYTSFFPC PPPLFPSKNL DKEETGGNMR KPSDLNHASV WDEGENTYYF 60 KSNRFDLNER LYGEGRSTDE AAEIKHIYQD CDAEAPNDGR SENIQKLCAR GHWRPAEDVK 120 LKELVDQFGP HNWNLIAERL PGRSGKSCRL RWFNQLDPKI NKRPFSAEEE EKLLQSHKLF 180 GNKWAMISKL FPGRTDNAVK NHWHVIMARK QREQNICVYK KLKPNPISAA SMKEFVACSD 240 ESTVTTVSNT GVELMLTPTS VRETPCLFAK SPQPPSPMGS NEGPTHNVID LNKQQLSEFA 300 GKSEFDSEGS ALNSTICMKV HKDKLKVFGD DKDRVNEPGA ICSNRFIPLI DFLGLGLA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17800.1 | 6e-63 | MYB family protein |