PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0413.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Dof
Protein Properties Length: 306aa    MW: 33175 Da    PI: 9.3499
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0413.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1222e-3879138362
               zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                          e+alkcprC s+ntkfCyynnys sqPryfCk+CrryWt+GGalrnvPvGgg+r+nk+ s
  Kaladp0045s0413.1.p  79 ETALKCPRCASMNTKFCYYNNYSHSQPRYFCKTCRRYWTQGGALRNVPVGGGCRRNKRYS 138
                          6789*****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MIFSSMPNYN LNPTSNLNHQ QVNHQQLGSS AEGPHPQPPH TPILPNSPPP QQPAIHYQGT  60
IRPGSMTDRA RMANMPIPET ALKCPRCASM NTKFCYYNNY SHSQPRYFCK TCRRYWTQGG  120
ALRNVPVGGG CRRNKRYSSK VGGGGSSGTA RSKSPAHSGS TPSNSIGYSS GELIRHGSHI  180
HPRNSFMAPL NLHFSDYSAE DIGVSCPGMI PRVSSSADHF NLLTGNGNTA TSSSETDPWT  240
FIHQHQLAQV YHHPSSFGGN LEAPLTETPS LYGVEGHVNA SQPTKNKLPC TADTQLNLLK  300
LEKGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.12e-42Dof family protein