PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0411.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 369aa MW: 42657.7 Da PI: 9.6744

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0411.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.2	4.4e-14	9	58	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW eEd ll +vkq+G++ W++++++m + R +k+c +rw +yl Kaladp0045s0411.1.p 9 RQRWRVEEDALLRAYVKQYGPREWHLVSQRMSqpLDRDAKSCLERWKNYL 58 89**********************************************97 PP
2	Myb_DNA-binding	34.9	3.7e-11	64	108	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T++E+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + Kaladp0045s0411.1.p 64 KGSLTEDEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 108 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MTTTEMKERQ RWRVEEDALL RAYVKQYGPR EWHLVSQRMS QPLDRDAKSC LERWKNYLKP 60 GIKKGSLTED EQRLVIRLQA KHGNKWKKIA AEVPGRTAKR LGKWWEVFKE KQQRELKENY 120 KTIEPIDEGK YDQILETFAE KLVKDRPNPT TYIMPTCNGS LDPSPTPPSP HPSTAPLPPW 180 LSHSNNNQSV RPPSPSVTLS LSPSTITANP TIPWLQSEII AMPHSMANLP LHSSPAQRGE 240 SSFVIPEIFE CCRDLEESHR LLAAHKKEAA WRLRRVELQL ESEKACRKRE KMEEMEAKIK 300 AIRDEEKVSL ERMENEYREQ LSSLRREAEA KEQKLYEQWA SKHLRLAKCV EQASSGARLP 360 EANGGRRI*

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MTTTEMKERQ RWRVEEDALL RAYVKQYGPR EWHLVSQRMS QPLDRDAKSC LERWKNYLKP  60
GIKKGSLTED EQRLVIRLQA KHGNKWKKIA AEVPGRTAKR LGKWWEVFKE KQQRELKENY  120
KTIEPIDEGK YDQILETFAE KLVKDRPNPT TYIMPTCNGS LDPSPTPPSP HPSTAPLPPW  180
LSHSNNNQSV RPPSPSVTLS LSPSTITANP TIPWLQSEII AMPHSMANLP LHSSPAQRGE  240
SSFVIPEIFE CCRDLEESHR LLAAHKKEAA WRLRRVELQL ESEKACRKRE KMEEMEAKIK  300
AIRDEEKVSL ERMENEYREQ LSSLRREAEA KEQKLYEQWA SKHLRLAKCV EQASSGARLP  360
EANGGRRI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-120	MYB family protein