PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0314.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 369aa MW: 41523.4 Da PI: 5.8635

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0314.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEd++l+++++ +G g+W++ +r g+ R++k+c++rw +yl Kaladp0045s0314.1.p 14 RGRWTAEEDQILIKYIQDHGEGSWRSLPRNAGLMRCGKSCRLRWVNYL 61 8*********************************************97 PP
2	Myb_DNA-binding	54.5	2.7e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l++++++ lG++ W++Ia+ ++ gRt++++k++w++yl Kaladp0045s0314.1.p 67 RGNISPQEEDLIIKLHATLGNR-WSLIASQLP-GRTDNDIKNHWNSYL 112 7899****************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGRAPCCAKA GLKRGRWTAE EDQILIKYIQ DHGEGSWRSL PRNAGLMRCG KSCRLRWVNY 60 LRTDLKRGNI SPQEEDLIIK LHATLGNRWS LIASQLPGRT DNDIKNHWNS YLSRSINVWR 120 RPAASDTLPQ HILDNLAKLS AKLNNNPSTK KKSNERNVAA IKETGDKQIP VNPHDNNDKL 180 QTTPDVHKQD LLPTRNSWSQ KCFESILFLL EDQQDNAEEM EMGPLENYID ELVSLSDDMV 240 ANTATPQTIF SNEILLSPTA IHLEFMNNED LRSTTSQAEM GSSCRLSTQQ QQPSLSPSPS 300 PSSLSLSSHF TIDQPLCISG ADLNWEDYLV DNPDHHDLMN HELGSFHNNI SWLWDDPFHG 360 HDAGSLGL*

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGRAPCCAKA GLKRGRWTAE EDQILIKYIQ DHGEGSWRSL PRNAGLMRCG KSCRLRWVNY  60
LRTDLKRGNI SPQEEDLIIK LHATLGNRWS LIASQLPGRT DNDIKNHWNS YLSRSINVWR  120
RPAASDTLPQ HILDNLAKLS AKLNNNPSTK KKSNERNVAA IKETGDKQIP VNPHDNNDKL  180
QTTPDVHKQD LLPTRNSWSQ KCFESILFLL EDQQDNAEEM EMGPLENYID ELVSLSDDMV  240
ANTATPQTIF SNEILLSPTA IHLEFMNNED LRSTTSQAEM GSSCRLSTQQ QQPSLSPSPS  300
PSSLSLSSHF TIDQPLCISG ADLNWEDYLV DNPDHHDLMN HELGSFHNNI SWLWDDPFHG  360
HDAGSLGL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	3e-67	MYB family protein