PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0045s0285.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 441aa MW: 48028.6 Da PI: 8.7369 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.4 | 1.2e-05 | 76 | 98 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Kaladp0045s0285.2.p 76 FVCEICNKGFQRDQNLQLHRRGH 98 89*******************88 PP | |||||||
2 | zf-C2H2 | 15.8 | 3.9e-05 | 152 | 174 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ Kaladp0045s0285.2.p 152 WKCDKCSKKYAVQSDWKAHQKTC 174 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 441 aa Download sequence |
MSNLTGEDGS FTSAANSCED DEAHQQRQTQ AAAGSSNDGS LQLPPLKKKR NLPGTPDPTA 60 EVVALSPTTL MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRSNA EVKKRVYICP 120 EPSCVHHNPA RALGDLTGIK KHFSRKHGEK KWKCDKCSKK YAVQSDWKAH QKTCGTREYK 180 CDCGTIFSRR DSFITHRAFC DALAEENSKV NQGQQQEKDV AGSNHSHDAQ AVQELISSSL 240 PHFGSFDPKN PLKSMPQELV PMPFRAMNGM FSTSSGTVFS NPRAHSPSTL QLSSISSTSF 300 SSYLQQFGGS TPNAYTSATA LLQKAAQMGA TTASNTINSP MMHKSYNVSN MAGAADQGLM 360 TGYVPVFESQ QQPRQYQSHQ QMLLGGGFGT DQQMLEAATN GSSTAMDEQM SMFSGLFMNG 420 RGGGDPGHSS GVALTWRDQA * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-105 | C2H2 family protein |