PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0272.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 388aa MW: 43096.2 Da PI: 5.2413

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0272.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.9	4.1e-08	20	64	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 r+C+ ++e + l+C+ ++ lC C e H+ Ht+++ Kaladp0045s0272.3.p 20 RRVCDFCSESTAVLYCRADSAKLCLACDREVHSTnplftkHTRTQ 64 689****99*******************7689999998765 PP
2	zf-B_box	25.6	2.6e-08	64	97	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkgHt 38 + C+ ++e ++++ C +++ lC++C +H +H+ Kaladp0045s0272.3.p 64 QLCDACDESPVTILCSTDDLVLCQNCDWDTH-SHK 97 78****************************9.776 PP
3	CCT	62.1	1.8e-21	342	385	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ al+RYkeK+++R+++K+irYesRK++AesR R+KGrF+k++ Kaladp0045s0272.3.p 342 RDTALSRYKEKKRNRRYDKHIRYESRKVRAESRTRIKGRFAKST 385 899***************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MGDLVAQTGV GDDGDQMLKR RVCDFCSEST AVLYCRADSA KLCLACDREV HSTNPLFTKH 60 TRTQLCDACD ESPVTILCST DDLVLCQNCD WDTHSHKSEM SVHDRKFLEG FSGCPKVCEL 120 MLVLGLEGLG KKALLGSGEE SEREGFDQSG GYGFSDFLVW DTPTVFNLDD LIGGVDSSCG 180 FGDAEAQALP SPKVTKATSG KHKEEIIRQL REMAKSEPGF SYDCEDVDPL DGINGAERVL 240 QPRDVHVEHD EKPSIRDAYE QENGLRWLSE SNKHSVQVFI PKLSKTATED GLGLVPEKPS 300 DAGVCPSQGT DGHAEVFSVP IKTDILPYVP KVYTHEFNSQ ERDTALSRYK EKKRNRRYDK 360 HIRYESRKVR AESRTRIKGR FAKSTDQ*

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MGDLVAQTGV GDDGDQMLKR RVCDFCSEST AVLYCRADSA KLCLACDREV HSTNPLFTKH  60
TRTQLCDACD ESPVTILCST DDLVLCQNCD WDTHSHKSEM SVHDRKFLEG FSGCPKVCEL  120
MLVLGLEGLG KKALLGSGEE SEREGFDQSG GYGFSDFLVW DTPTVFNLDD LIGGVDSSCG  180
FGDAEAQALP SPKVTKATSG KHKEEIIRQL REMAKSEPGF SYDCEDVDPL DGINGAERVL  240
QPRDVHVEHD EKPSIRDAYE QENGLRWLSE SNKHSVQVFI PKLSKTATED GLGLVPEKPS  300
DAGVCPSQGT DGHAEVFSVP IKTDILPYVP KVYTHEFNSQ ERDTALSRYK EKKRNRRYDK  360
HIRYESRKVR AESRTRIKGR FAKSTDQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	2e-77	CO-like family protein