PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0045s0272.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | CO-like | ||||||||
Protein Properties | Length: 387aa MW: 42968.1 Da PI: 5.2413 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 25 | 4e-08 | 20 | 64 | 3 | 41 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 r+C+ ++e + l+C+ ++ lC C e H+ Ht+++ Kaladp0045s0272.2.p 20 RRVCDFCSESTAVLYCRADSAKLCLACDREVHSTnplftkHTRTQ 64 689******99*********************7689999998765 PP | |||||||
2 | zf-B_box | 25.6 | 2.6e-08 | 64 | 97 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkgHt 38 + C+ ++e ++++ C +++ lC++C +H +H+ Kaladp0045s0272.2.p 64 QLCDACDESPVTILCSTDDLVLCQNCDWDTH-SHK 97 78****************************9.776 PP | |||||||
3 | CCT | 62.1 | 1.8e-21 | 341 | 384 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ al+RYkeK+++R+++K+irYesRK++AesR R+KGrF+k++ Kaladp0045s0272.2.p 341 RDTALSRYKEKKRNRRYDKHIRYESRKVRAESRTRIKGRFAKST 384 899***************************************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 387 aa Download sequence |
MGDLVAQTGV GDDGDQMLKR RVCDFCSEST AVLYCRADSA KLCLACDREV HSTNPLFTKH 60 TRTQLCDACD ESPVTILCST DDLVLCQNCD WDTHSHKSEM SVHDRKFLEG FSGCPKVCEL 120 MLVLGLEGLG KKALLGSGEE SEREGFDQSG GYGFSDFLVW DTPTVFNLDD LIGGVDSSCG 180 FGDAEAQALP SPKVTKATSG KHKEEIIRQL REMAKSEPGF SYDCEDVDPL DGINGAERVL 240 QPRDVHVEHD EKPSIRDAYE ENGLRWLSES NKHSVQVFIP KLSKTATEDG LGLVPEKPSD 300 AGVCPSQGTD GHAEVFSVPI KTDILPYVPK VYTHEFNSQE RDTALSRYKE KKRNRRYDKH 360 IRYESRKVRA ESRTRIKGRF AKSTDQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47890.1 | 3e-76 | CO-like family protein |