PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0244.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 360aa MW: 40670 Da PI: 7.0188

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0244.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	199	218	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C k+F+r n++ H+ Kaladp0045s0244.1.p 199 FSCHLCFKTFNRYNNMQMHM 218 89*****************9 PP
2	zf-C2H2	14.5	0.0001	283	305	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Kaladp0045s0244.1.p 283 FMCRKCGKAFAVRGDWRTHEKNC 305 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MNDNHPYFSY PFNNGFFYSS SAAYSSSSQS FNNPTNPYIS NSSTAFYLNY YNNLKNNFNN 60 NNSFTHHYNS PTPPPSPPLK QALPLLSLSP TRHNNVEQER QEGREMDQEA MAVDGDHEQD 120 QDDRCLSIDL QLGLPDVCVP SADLLISSSI SSSVDEGGAT IADSSNCSGY ESATPTTRLN 180 KGQYWIPTPA QILIGPTQFS CHLCFKTFNR YNNMQMHMWG HGSQYRRGPE SLRGTQPTAM 240 LRLPCYCCSP GCRNNIDHPR AKPLKDFRTL QTHYKRKHGM KPFMCRKCGK AFAVRGDWRT 300 HEKNCGKLWY CTCGSDFKHK RSLKDHIRAF GDGHAAYGID CFDQEDDEAE LSDIEQDNN*

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MNDNHPYFSY PFNNGFFYSS SAAYSSSSQS FNNPTNPYIS NSSTAFYLNY YNNLKNNFNN  60
NNSFTHHYNS PTPPPSPPLK QALPLLSLSP TRHNNVEQER QEGREMDQEA MAVDGDHEQD  120
QDDRCLSIDL QLGLPDVCVP SADLLISSSI SSSVDEGGAT IADSSNCSGY ESATPTTRLN  180
KGQYWIPTPA QILIGPTQFS CHLCFKTFNR YNNMQMHMWG HGSQYRRGPE SLRGTQPTAM  240
LRLPCYCCSP GCRNNIDHPR AKPLKDFRTL QTHYKRKHGM KPFMCRKCGK AFAVRGDWRT  300
HEKNCGKLWY CTCGSDFKHK RSLKDHIRAF GDGHAAYGID CFDQEDDEAE LSDIEQDNN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-123	C2H2 family protein