PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0237.9.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 682aa MW: 78436.2 Da PI: 7.1444

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0237.9.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.8e-07	1	26	66	91
FAR1 66 lkvkkekdgkwevtkleleHnHelap 91 ++vk++++gkw++++++++HnHel p Kaladp0045s0237.9.p 1 MHVKRRQTGKWYIYNFVKDHNHELLP 26 89*********************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MHVKRRQTGK WYIYNFVKDH NHELLPEQAH FFRSHRNVDS IKNDLRIRKR KILAAGSKQF 60 SAYQNVDFLE GYIRNQHDKG QILSLESGDS QMLLEFCMYM QDKNPKFFYA MDFNEEHRLR 120 NVFWVSSKGV DDYNYFSDVV SVDTTYVTAK YKIPLVIIMG VNNHIQPTLL GCGLIADETL 180 YTFVWLLQTW LISMGGRAPR VILTDQNSAL KQAVAAVLPE SRHCFALWNV LEKIPSKLEY 240 VIRWQDNFVI KFDKCIYKSL TEEQFESRWS KLLDRFTLRE DEWVQSLYED RRQWVPTFMR 300 DISFAGLSAP SRAESLNTWF DNYIDAYSSL REFIERYKLI VEDMHEEEAK ANFDGWHETP 360 DLKTPSPFEK QTLLVYTHEI FKKFQIEVLG AAACHLKKEN DYGTIATYSV KDFADNQVFM 420 VTWDQTKLDI GCSCRSFEYK GYVCRHAIVV LQMSGVFSIP FKYILQRWTN VAVSRHAMSD 480 RLDEVQAKIR RFNDLCRRAI ILGEEGSLSE QSYNVALIAI EDALKQFKNT SSLDCDSRPH 540 SALRQAFSGN EEVNDGSVAA AVHEVPGTSL TSSSKSQKRS DAGNKKFESY ESMMGKVQPV 600 QGLVNAGSQV GYAFMDNAHA TSLIPNAPLV AQHNMAPVRL QSLPAHIQNT MPAQYHSSIP 660 PYVEDKHIQD KSPPAHLVHM L*

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MHVKRRQTGK WYIYNFVKDH NHELLPEQAH FFRSHRNVDS IKNDLRIRKR KILAAGSKQF  60
SAYQNVDFLE GYIRNQHDKG QILSLESGDS QMLLEFCMYM QDKNPKFFYA MDFNEEHRLR  120
NVFWVSSKGV DDYNYFSDVV SVDTTYVTAK YKIPLVIIMG VNNHIQPTLL GCGLIADETL  180
YTFVWLLQTW LISMGGRAPR VILTDQNSAL KQAVAAVLPE SRHCFALWNV LEKIPSKLEY  240
VIRWQDNFVI KFDKCIYKSL TEEQFESRWS KLLDRFTLRE DEWVQSLYED RRQWVPTFMR  300
DISFAGLSAP SRAESLNTWF DNYIDAYSSL REFIERYKLI VEDMHEEEAK ANFDGWHETP  360
DLKTPSPFEK QTLLVYTHEI FKKFQIEVLG AAACHLKKEN DYGTIATYSV KDFADNQVFM  420
VTWDQTKLDI GCSCRSFEYK GYVCRHAIVV LQMSGVFSIP FKYILQRWTN VAVSRHAMSD  480
RLDEVQAKIR RFNDLCRRAI ILGEEGSLSE QSYNVALIAI EDALKQFKNT SSLDCDSRPH  540
SALRQAFSGN EEVNDGSVAA AVHEVPGTSL TSSSKSQKRS DAGNKKFESY ESMMGKVQPV  600
QGLVNAGSQV GYAFMDNAHA TSLIPNAPLV AQHNMAPVRL QSLPAHIQNT MPAQYHSSIP  660
PYVEDKHIQD KSPPAHLVHM L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	0.0	FAR1 family protein