PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0236.4.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 380aa    MW: 41228.6 Da    PI: 6.6044
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0236.4.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.4e-13319364655
                          HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +++Er RR +i +++ +L+el+P+     +k  + +++L +Av+YIk+Lq
  Kaladp0045s0236.4.p 319 SIAERVRRTKISERMRRLQELVPNM----DKQTNTSDMLDMAVDYIKDLQ 364
                          689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MDADLHQARQ FNPVVVGGGG GGSGGLTRYR SAPSSYFSNF GMEYKDVSDF LRPPPPKPLS  60
PQIDRIFAQL ASEIPGDHTL EVEAAITTPV MKLEIEPELP PAAPVMMASY TPSAGLPPPH  120
PLSRTSSGVN TSSHRGLKSS AAQPVRIPVV EKPSSGSNIA RHNSLPAGLF SQIDVHNVAA  180
AYFCTGSNQA NSSSDLMSAY SGIGNDNIKP EEDDDYMLNG FWNDSPSTEK LLTGVKRERA  240
EDEFLSGGAL EDIKPFSKDS NIPAAGEMKK SGLLSHHLSL PKSSMEMLSA MEKFLDLQDS  300
TTVPVGVRAK RGCATHPRSI AERVRRTKIS ERMRRLQELV PNMDKQTNTS DMLDMAVDYI  360
KDLQQRVQIL QACRERCTC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.14e-45bHLH family protein