PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0220.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 301aa    MW: 33830.9 Da    PI: 7.1381
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0220.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.45.3e-112267346
                         SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                         +WT+eE + + +a + + ++   +W++Ia++++ g+t  ++++ ++ 
  Kaladp0045s0220.1.p 22 KWTKEENKEFERALAIHDKNttdRWDKIAAMIP-GKTVTDVINQYRE 67
                         8********************************.**********986 PP
2Myb_DNA-binding41.72.6e-13124168347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+ E+++++ +  ++G+g+W+ I+r +  ++t+ q+ s+ qky
  Kaladp0045s0220.1.p 124 PWTEAEHKRFLMGLVKHGKGDWRNISRNFVRTKTPTQVASHAQKY 168
                          8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEALYPMSHM VNPDWFLADP PKWTKEENKE FERALAIHDK NTTDRWDKIA AMIPGKTVTD  60
VINQYRELED DVSDIEAGLV PIPGYHGSSF TLDLMDDSLR FNGERKRHTP AAAAAEHEKK  120
KGVPWTEAEH KRFLMGLVKH GKGDWRNISR NFVRTKTPTQ VASHAQKYFI RLNSGVKDKR  180
RPSIHDITTG SLADSATASG MDKAQSAAAL PREEKNMTHN ARAPTNVEDG TVWNKQDMND  240
KTESSFLMSD LGQRDLFTTL PSTCETDSLH VQGQNVYNVA YGGQYNPLFQ IQSSRQRIVG  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.19e-83MYB family protein