PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0160.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 343aa    MW: 35907.2 Da    PI: 5.819
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0160.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.00015217239123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++Cg  Fs+   L  H+r+H
  Kaladp0045s0160.1.p 217 HECSICGSAFSSGQALGGHMRRH 239
                          78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MNFEAVMESA EVESSATGEF AAGASPQIAK RKRTKRRRIA VSSSSSGGGD NNKQGCVAAS  60
EEEEEEDRNY ESTVTTATEE EEDMANCLIL LARSGGDGGF GVVNREDSVK TERKRKTTIG  120
SRKSAEASSV AGVGGGGVGV YECRTCDKAF QSFQALGGHR ASHHKKAKVT ATADVTPEEV  180
KLVDQIQLLS SFSPQPVIHL KPSSSSSSAA AHSSKVHECS ICGSAFSSGQ ALGGHMRRHR  240
GAVTNDNNQI APAAAVAESS SHREEGIVVT ERDMSSSNNN NNFLSSLDLN LPAPADEEDE  300
QRRSSYHEQF AGGQGNSNSS STAAPATAAL VFSAPPLVGC YF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13539KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.16e-29C2H2 family protein