PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0044s0073.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 432aa MW: 47158.9 Da PI: 6.0977

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0044s0073.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEd++lv+++++ G g+W++ +++ g+ R++k+c++rw +yl Kaladp0044s0073.1.p 14 RGRWTAEEDDILVNYINKNGIGSWRSLPKKAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	49.8	8e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T +E++ ++++++ lG++ W++Ia+ ++ gRt++++k++w++ Kaladp0044s0073.1.p 67 RGNFTSDEQDTIIKLHASLGNK-WSLIANQLP-GRTDNEIKNYWNST 111 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MGRAPCCAKV GLNRGRWTAE EDDILVNYIN KNGIGSWRSL PKKAGLLRCG KSCRLRWINY 60 LRSDLKRGNF TSDEQDTIIK LHASLGNKWS LIANQLPGRT DNEIKNYWNS TLSRRVDTFR 120 RPVAEGQSQV LISGLTSSSG AAGEGAVTIV AVNRRRGRTS RAAMKKNKNS INERSNKSKP 180 VGGNQALYES NPIHSSSYNL SSITATLSRS HSTGSSITSA ATATSSPLLT LPQTPNLEKE 240 GCLLLPADEE DHALESLVLE SLLTSQNDTQ RGAQHQGDLV SKDASDCERV DLSFDDIGNF 300 DVELVEVNGA SGVLAGSRSS NDTINNKSSS SSNNVGHGVL KEASLNHQSM ILGFEECASL 360 GADWDWENIV HQDDDHNNNQ QWSSNIEEDG SIAWLWDYAH HQDSGGNNGV GKNQETYYEE 420 HREAMVAWLL S*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MGRAPCCAKV GLNRGRWTAE EDDILVNYIN KNGIGSWRSL PKKAGLLRCG KSCRLRWINY  60
LRSDLKRGNF TSDEQDTIIK LHASLGNKWS LIANQLPGRT DNEIKNYWNS TLSRRVDTFR  120
RPVAEGQSQV LISGLTSSSG AAGEGAVTIV AVNRRRGRTS RAAMKKNKNS INERSNKSKP  180
VGGNQALYES NPIHSSSYNL SSITATLSRS HSTGSSITSA ATATSSPLLT LPQTPNLEKE  240
GCLLLPADEE DHALESLVLE SLLTSQNDTQ RGAQHQGDLV SKDASDCERV DLSFDDIGNF  300
DVELVEVNGA SGVLAGSRSS NDTINNKSSS SSNNVGHGVL KEASLNHQSM ILGFEECASL  360
GADWDWENIV HQDDDHNNNQ QWSSNIEEDG SIAWLWDYAH HQDSGGNNGV GKNQETYYEE  420
HREAMVAWLL S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	2e-71	MYB family protein