PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0043s0294.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 418aa MW: 47473.6 Da PI: 4.4998

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0043s0294.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.6	5.1e-16	174	258	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++a ++ + +r++l+ W+ev++k+ +e ++er+ +qC+++ + l+k+ykk+k+ + ++ss++ yf++++ Kaladp0043s0294.1.p 174 WTEHETFVLLDAWGDRFLQHGRKSLRSEEWQEVAEKVsQESKIERTDTQCRNRVDTLKKKYKKEKAKFGAA-GGQSSKWIYFKKMD 258 ***********************************88999*********************9986.78888******7 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MDDNEDDVRY NSNAAGGDRQ DQEGYDREKG AEQVGSYERL NNEYGENEGE DDEEAAEELV 60 EDEEEEEDDD DDDEDGDGVQ RIGNNVVNDG DEEDGDEGVE EKRNEYKRRI EEIDFEKHPK 120 KRRLKNLISN YEFAPRAVTQ AQPSAVTANV VAASAPPVPA PKHSSGGRNA LADWTEHETF 180 VLLDAWGDRF LQHGRKSLRS EEWQEVAEKV SQESKIERTD TQCRNRVDTL KKKYKKEKAK 240 FGAAGGQSSK WIYFKKMDVL MSPPPKQPGL SCGVDSGEYV FSNPRVYLNR ANGLDEMRDS 300 PGHSDSTEDD TYDSDGLPPR RKKPVRVNNT NSNSNSRNYC SPMKLLADSL HNFSKIYEKI 360 ESNKRQQMVE LEKMRMDFHR DLEQEKKLIL ERAQAKIAKI WKGNDDENGA SAENMSS*

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MDDNEDDVRY NSNAAGGDRQ DQEGYDREKG AEQVGSYERL NNEYGENEGE DDEEAAEELV  60
EDEEEEEDDD DDDEDGDGVQ RIGNNVVNDG DEEDGDEGVE EKRNEYKRRI EEIDFEKHPK  120
KRRLKNLISN YEFAPRAVTQ AQPSAVTANV VAASAPPVPA PKHSSGGRNA LADWTEHETF  180
VLLDAWGDRF LQHGRKSLRS EEWQEVAEKV SQESKIERTD TQCRNRVDTL KKKYKKEKAK  240
FGAAGGQSSK WIYFKKMDVL MSPPPKQPGL SCGVDSGEYV FSNPRVYLNR ANGLDEMRDS  300
PGHSDSTEDD TYDSDGLPPR RKKPVRVNNT NSNSNSRNYC SPMKLLADSL HNFSKIYEKI  360
ESNKRQQMVE LEKMRMDFHR DLEQEKKLIL ERAQAKIAKI WKGNDDENGA SAENMSS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	123	KRRIEEIDFEKHPKKRR
2	119	126	PKKRRLKN
3	120	125	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-64	Trihelix family protein