PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0043s0246.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 462aa MW: 51385.3 Da PI: 4.8829

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0043s0246.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.2	6.9e-49	6	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 l+pG+rFhPtd el+++yL+kkv+gk++ + +vi+evd+yk+ P+dLp k +k+++ ewyfF++r++kya+g r nrat+ gyWk+tg+ Kaladp0043s0246.2.p 6 LAPGIRFHPTDVELIKYYLQKKVTGKHICF-DVISEVDVYKFSPSDLPdKsLLKSTDLEWYFFCPRERKYANGARMNRATEYGYWKTTGR 94 579**********************998.99**********96435566677**************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 d++++ ++++vg+ ktL++++grap+g++tdWvmheyrle Kaladp0043s0246.2.p 95 DRPIKY-NHRTVGMIKTLIYHEGRAPHGNRTDWVMHEYRLE 134 **.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MAHKSLAPGI RFHPTDVELI KYYLQKKVTG KHICFDVISE VDVYKFSPSD LPDKSLLKST 60 DLEWYFFCPR ERKYANGARM NRATEYGYWK TTGRDRPIKY NHRTVGMIKT LIYHEGRAPH 120 GNRTDWVMHE YRLEDEDLSK SGVAQDAYVI CKIFLKSGPG PRSTQHLFKE EDWIDGDDDG 180 TSLDECPLNG LSFPSALNLI NPGSSTVTNP CNPGSISIDA SIEAGPSASV TFLKAADSDK 240 YNILLSELPN SPKEFPSLMN TQKDVSLSEL PQASNSNVYE MLTSTNYKQC QVGMHGNPCS 300 FPELSNDAMF STWEMHGGDN HMLPSRSHRE EVEHLPDINR GGMVQSSTLA HPDVYNELGN 360 LFDLGVDALN DDSFIELDDL SNPLGDEPHW SHLIPSDDLL SGVDPHLNRV SSFHPVDEYG 420 GSFCDNAPAE SLLLPGSSLG SIGHTDIQQK VSFLISYKNV Y*

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MAHKSLAPGI RFHPTDVELI KYYLQKKVTG KHICFDVISE VDVYKFSPSD LPDKSLLKST  60
DLEWYFFCPR ERKYANGARM NRATEYGYWK TTGRDRPIKY NHRTVGMIKT LIYHEGRAPH  120
GNRTDWVMHE YRLEDEDLSK SGVAQDAYVI CKIFLKSGPG PRSTQHLFKE EDWIDGDDDG  180
TSLDECPLNG LSFPSALNLI NPGSSTVTNP CNPGSISIDA SIEAGPSASV TFLKAADSDK  240
YNILLSELPN SPKEFPSLMN TQKDVSLSEL PQASNSNVYE MLTSTNYKQC QVGMHGNPCS  300
FPELSNDAMF STWEMHGGDN HMLPSRSHRE EVEHLPDINR GGMVQSSTLA HPDVYNELGN  360
LFDLGVDALN DDSFIELDDL SNPLGDEPHW SHLIPSDDLL SGVDPHLNRV SSFHPVDEYG  420
GSFCDNAPAE SLLLPGSSLG SIGHTDIQQK VSFLISYKNV Y*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	1e-79	NAC family protein