PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0269.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 713aa MW: 77871.5 Da PI: 5.4011

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0269.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.5	2.5e-18	107	206	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+l+ sd+++ grlv+pkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ ++ +L +gD v+F++ + Kaladp0042s0269.4.p 107 FEKTLSASDAGRIGRLVVPKKCAEAYfpHISQPEGLPLKVQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTSYIQSMQLLAGDKVTFSRLE 195 99************************556667778***********99899999999.*******************766 PP SSEE..EEEEE- CS B3 87 rsefelvvkvfr 98 e++lv+++++ Kaladp0042s0269.4.p 196 -PEGKLVMGFRK 206 .77777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 713 aa Download sequence
MEMLSAKENS SALRLEPLLK TSSANESNCE MTASGSLLRA APLSQPPKSF HSNHSSEFDP 60 CSETPVQNGR SRGDGRNKNQ LLTRYLPRTT DEELQKIAGS SEIKPLFEKT LSASDAGRIG 120 RLVVPKKCAE AYFPHISQPE GLPLKVQDVK GKEWVFQFRF WPNNNSRMYV LEGVTSYIQS 180 MQLLAGDKVT FSRLEPEGKL VMGFRKASNG STDLDDEPNK ISNNGDASAR INFNLSRADK 240 SGYIAKDIMN VKSSVSRKRK SSTFSSNRHL LFESMDVCEL KITLEEAQRL IRPSPNHLSH 300 VGIVENEIEE FEDCPVIGKP TIFTTDQMGE SIQWAQCEDC LKWRRLPADA LLPAKWICSK 360 NKWDLARSTC SSPQDISDEQ LDNLLFPKNQ SVSKKMRAAN QELETVEGLE GLDALANLAI 420 LGEGQAIASS GHITTKHPRH KMGCSCIVCI QPPSGKGLKH KQTCDCTVCL TVKRRFQTLM 480 LRREKKQQEK DAEAASEKHQ GCSLLIEKSP ENDPLTQEDS SAATPTLKEV TDEGSVDISF 540 GKESSASTLK GQIDLNIKPE RDDPLISSEL DTLMFSYNTA EAVDQMQSSI HCASAEIVRD 600 PTQTVEVVDG TGSASVTNQL VAAPPADAHP EKESSPTVKV EETIVNSTGT TSVTNQLVAA 660 PPADAHPEKE SSPAVKVVEA IIDGTDTARI TNQLAAARPD EESTPTVTTT SG*

Sequence ? help Back to Top

Protein Sequence Length: 713 aa Download sequence

MEMLSAKENS SALRLEPLLK TSSANESNCE MTASGSLLRA APLSQPPKSF HSNHSSEFDP  60
CSETPVQNGR SRGDGRNKNQ LLTRYLPRTT DEELQKIAGS SEIKPLFEKT LSASDAGRIG  120
RLVVPKKCAE AYFPHISQPE GLPLKVQDVK GKEWVFQFRF WPNNNSRMYV LEGVTSYIQS  180
MQLLAGDKVT FSRLEPEGKL VMGFRKASNG STDLDDEPNK ISNNGDASAR INFNLSRADK  240
SGYIAKDIMN VKSSVSRKRK SSTFSSNRHL LFESMDVCEL KITLEEAQRL IRPSPNHLSH  300
VGIVENEIEE FEDCPVIGKP TIFTTDQMGE SIQWAQCEDC LKWRRLPADA LLPAKWICSK  360
NKWDLARSTC SSPQDISDEQ LDNLLFPKNQ SVSKKMRAAN QELETVEGLE GLDALANLAI  420
LGEGQAIASS GHITTKHPRH KMGCSCIVCI QPPSGKGLKH KQTCDCTVCL TVKRRFQTLM  480
LRREKKQQEK DAEAASEKHQ GCSLLIEKSP ENDPLTQEDS SAATPTLKEV TDEGSVDISF  540
GKESSASTLK GQIDLNIKPE RDDPLISSEL DTLMFSYNTA EAVDQMQSSI HCASAEIVRD  600
PTQTVEVVDG TGSASVTNQL VAAPPADAHP EKESSPTVKV EETIVNSTGT TSVTNQLVAA  660
PPADAHPEKE SSPAVKVVEA IIDGTDTARI TNQLAAARPD EESTPTVTTT SG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	256	261	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-142	B3 family protein