PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0269.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 790aa MW: 86605.2 Da PI: 5.604

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0269.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.3	2.9e-18	184	283	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+l+ sd+++ grlv+pkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ ++ +L +gD v+F++ + Kaladp0042s0269.3.p 184 FEKTLSASDAGRIGRLVVPKKCAEAYfpHISQPEGLPLKVQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTSYIQSMQLLAGDKVTFSRLE 272 99************************556667778***********99899999999.*******************766 PP SSEE..EEEEE- CS B3 87 rsefelvvkvfr 98 e++lv+++++ Kaladp0042s0269.3.p 273 -PEGKLVMGFRK 283 .77777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MQWREAPNLY NSLLAQSEAH TRGPCDGGVS NGLNRYYSNE VFPLGSLEKQ SRREIDWSMR 60 RIARTSEIHE NGNSGVLMEM LSAKENSSAL RLEPLLKTSS ANESNCEMTA SGSLLRAAPL 120 SQPPKSFHSN HSSEFDPCSE TPVQNGRSRG DGRNKNQLLT RYLPRTTDEE LQKIAGSSEI 180 KPLFEKTLSA SDAGRIGRLV VPKKCAEAYF PHISQPEGLP LKVQDVKGKE WVFQFRFWPN 240 NNSRMYVLEG VTSYIQSMQL LAGDKVTFSR LEPEGKLVMG FRKASNGSTD LDDEPNKISN 300 NGDASARINF NLSRADKSGY IAKDIMNVKS SVSRKRKSST FSSNRHLLFE SMDVCELKIT 360 LEEAQRLIRP SPNHLSHVGI VENEIEEFED CPVIGKPTIF TTDQMGESIQ WAQCEDCLKW 420 RRLPADALLP AKWICSKNKW DLARSTCSSP QDISDEQLDN LLFPKNQSVS KKMRAANQEL 480 ETVEGLEGLD ALANLAILGE GQAIASSGHI TTKHPRHKMG CSCIVCIQPP SGKGLKHKQT 540 CDCTVCLTVK RRFQTLMLRR EKKQQEKDAE AASEKHQGCS LLIEKSPEND PLTQEDSSAA 600 TPTLKEVTDE GSVDISFGKE SSASTLKGQI DLNIKPERDD PLISSELDTL MFSYNTAEAV 660 DQMQSSIHCA SAEIVRDPTQ TVEVVDGTGS ASVTNQLVAA PPADAHPEKE SSPTVKVEET 720 IVNSTGTTSV TNQLVAAPPA DAHPEKESSP AVKVVEAIID GTDTARITNQ LAAARPDEES 780 TPTVTTTSG*

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MQWREAPNLY NSLLAQSEAH TRGPCDGGVS NGLNRYYSNE VFPLGSLEKQ SRREIDWSMR  60
RIARTSEIHE NGNSGVLMEM LSAKENSSAL RLEPLLKTSS ANESNCEMTA SGSLLRAAPL  120
SQPPKSFHSN HSSEFDPCSE TPVQNGRSRG DGRNKNQLLT RYLPRTTDEE LQKIAGSSEI  180
KPLFEKTLSA SDAGRIGRLV VPKKCAEAYF PHISQPEGLP LKVQDVKGKE WVFQFRFWPN  240
NNSRMYVLEG VTSYIQSMQL LAGDKVTFSR LEPEGKLVMG FRKASNGSTD LDDEPNKISN  300
NGDASARINF NLSRADKSGY IAKDIMNVKS SVSRKRKSST FSSNRHLLFE SMDVCELKIT  360
LEEAQRLIRP SPNHLSHVGI VENEIEEFED CPVIGKPTIF TTDQMGESIQ WAQCEDCLKW  420
RRLPADALLP AKWICSKNKW DLARSTCSSP QDISDEQLDN LLFPKNQSVS KKMRAANQEL  480
ETVEGLEGLD ALANLAILGE GQAIASSGHI TTKHPRHKMG CSCIVCIQPP SGKGLKHKQT  540
CDCTVCLTVK RRFQTLMLRR EKKQQEKDAE AASEKHQGCS LLIEKSPEND PLTQEDSSAA  600
TPTLKEVTDE GSVDISFGKE SSASTLKGQI DLNIKPERDD PLISSELDTL MFSYNTAEAV  660
DQMQSSIHCA SAEIVRDPTQ TVEVVDGTGS ASVTNQLVAA PPADAHPEKE SSPTVKVEET  720
IVNSTGTTSV TNQLVAAPPA DAHPEKESSP AVKVVEAIID GTDTARITNQ LAAARPDEES  780
TPTVTTTSG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	333	338	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-141	B3 family protein