PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0269.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 917aa MW: 100234 Da PI: 6.6537

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0269.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57	3.6e-18	311	410	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+l+ sd+++ grlv+pkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ ++ +L +gD v+F++ + Kaladp0042s0269.2.p 311 FEKTLSASDAGRIGRLVVPKKCAEAYfpHISQPEGLPLKVQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTSYIQSMQLLAGDKVTFSRLE 399 99************************556667778***********99899999999.*******************766 PP SSEE..EEEEE- CS B3 87 rsefelvvkvfr 98 e++lv+++++ Kaladp0042s0269.2.p 400 -PEGKLVMGFRK 410 .77777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 917 aa Download sequence
MAGGSAPASI PACVIVAPLF TRRGDFVKFS THKLQAGYLV SHAIRWLTKN SPLQHIHCGC 60 IASVQNFTLL DAGGVECITC AKRSGRHVLP GNLAYPPPSH GVYKTPFSER IRDLSTKSWS 120 QFSGVGPMQW REAPNLYNSL LAQSEAHTRG PCDGGVSNGL NRYYSNEVFP LGSLEKQSRR 180 EIDWSMRRIA RTSEIHENGN SGVLMEMLSA KENSSALRLE PLLKTSSANE SNCEMTASGS 240 LLRAAPLSQP PKSFHSNHSS EFDPCSETPV QNGRSRGDGR NKNQLLTRYL PRTTDEELQK 300 IAGSSEIKPL FEKTLSASDA GRIGRLVVPK KCAEAYFPHI SQPEGLPLKV QDVKGKEWVF 360 QFRFWPNNNS RMYVLEGVTS YIQSMQLLAG DKVTFSRLEP EGKLVMGFRK ASNGSTDLDD 420 EPNKISNNGD ASARINFNLS RADKSGYIAK DIMNVKSSVS RKRKSSTFSS NRHLLFESMD 480 VCELKITLEE AQRLIRPSPN HLSHVGIVEN EIEEFEDCPV IGKPTIFTTD QMGESIQWAQ 540 CEDCLKWRRL PADALLPAKW ICSKNKWDLA RSTCSSPQDI SDEQLDNLLF PKNQSVSKKM 600 RAANQELETV EGLEGLDALA NLAILGEGQA IASSGHITTK HPRHKMGCSC IVCIQPPSGK 660 GLKHKQTCDC TVCLTVKRRF QTLMLRREKK QQEKDAEAAS EKHQGCSLLI EKSPENDPLT 720 QEDSSAATPT LKEVTDEGSV DISFGKESSA STLKGQIDLN IKPERDDPLI SSELDTLMFS 780 YNTAEAVDQM QSSIHCASAE IVRDPTQTVE VVDGTGSASV TNQLVAAPPA DAHPEKESSP 840 TVKVEETIVN STGTTSVTNQ LVAAPPADAH PEKESSPAVK VVEAIIDGTD TARITNQLAA 900 ARPDEESTPT VTTTSG*

Sequence ? help Back to Top

Protein Sequence Length: 917 aa Download sequence

MAGGSAPASI PACVIVAPLF TRRGDFVKFS THKLQAGYLV SHAIRWLTKN SPLQHIHCGC  60
IASVQNFTLL DAGGVECITC AKRSGRHVLP GNLAYPPPSH GVYKTPFSER IRDLSTKSWS  120
QFSGVGPMQW REAPNLYNSL LAQSEAHTRG PCDGGVSNGL NRYYSNEVFP LGSLEKQSRR  180
EIDWSMRRIA RTSEIHENGN SGVLMEMLSA KENSSALRLE PLLKTSSANE SNCEMTASGS  240
LLRAAPLSQP PKSFHSNHSS EFDPCSETPV QNGRSRGDGR NKNQLLTRYL PRTTDEELQK  300
IAGSSEIKPL FEKTLSASDA GRIGRLVVPK KCAEAYFPHI SQPEGLPLKV QDVKGKEWVF  360
QFRFWPNNNS RMYVLEGVTS YIQSMQLLAG DKVTFSRLEP EGKLVMGFRK ASNGSTDLDD  420
EPNKISNNGD ASARINFNLS RADKSGYIAK DIMNVKSSVS RKRKSSTFSS NRHLLFESMD  480
VCELKITLEE AQRLIRPSPN HLSHVGIVEN EIEEFEDCPV IGKPTIFTTD QMGESIQWAQ  540
CEDCLKWRRL PADALLPAKW ICSKNKWDLA RSTCSSPQDI SDEQLDNLLF PKNQSVSKKM  600
RAANQELETV EGLEGLDALA NLAILGEGQA IASSGHITTK HPRHKMGCSC IVCIQPPSGK  660
GLKHKQTCDC TVCLTVKRRF QTLMLRREKK QQEKDAEAAS EKHQGCSLLI EKSPENDPLT  720
QEDSSAATPT LKEVTDEGSV DISFGKESSA STLKGQIDLN IKPERDDPLI SSELDTLMFS  780
YNTAEAVDQM QSSIHCASAE IVRDPTQTVE VVDGTGSASV TNQLVAAPPA DAHPEKESSP  840
TVKVEETIVN STGTTSVTNQ LVAAPPADAH PEKESSPAVK VVEAIIDGTD TARITNQLAA  900
ARPDEESTPT VTTTSG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	460	465	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-139	B3 family protein