PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0042s0136.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 527aa MW: 58005 Da PI: 4.6166 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.1 | 1.3e-15 | 36 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+vk+ G g+W+++ ++ g+ R++k+c++rw ++l Kaladp0042s0136.2.p 36 KGPWTSAEDAILIDYVKKRGEGNWNAVQKHSGLFRCGKSCRLRWANHL 83 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 89 | 132 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+ T+eE+ l++++++++G++ W++ a++++ gRt++++k++w++ Kaladp0042s0136.2.p 89 KGSITAEEERLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 132 6788******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 527 aa Download sequence |
MSIDSEDGPL SNEELESQLV DDESSRGIMN GVVLKKGPWT SAEDAILIDY VKKRGEGNWN 60 AVQKHSGLFR CGKSCRLRWA NHLRPNLKKG SITAEEERLI IELHAKMGNK WARMAAHLPG 120 RTDNEIKNYW NTRIKRRQRA GLPLYPPEVC LQALLENQSE GPSRTNSRGN RHTNTNSYDI 180 PDVVFHSMPA IHGALSYFPE LPGMTSDSGL LEAVGSTQQS NFVLSQQPKS FCGFRSHGYG 240 FDVIVKNELP TFEPVQDDPK FNQSPGLFFP YDRDPNDNHW SLGETQDSHS FVNCNFSTPK 300 PSCEAVKSEL PSFQYPDTDS SNWDTFYSAS PLPDLLDSHI QAGTPNEAVH SECSSPRNSG 360 LLDALLYEAR AISGVKNQLS NKSSNSSAVT PSEFAGETVP TFCETEIGNN SEPITPLGST 420 TSIYCGSVFT AAHGTFFDSH PLQETYFGCR LKPEPVDDVS NPVEVNSPAP ARLDSLEPGL 480 PFYSDWVDDQ ESGFNVNETT MEEGVAEALG NDFQYMGSTL PGQGWG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11440.1 | 8e-91 | MYB family protein |